Gene Mlg_2604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_2604 
Symbol 
ID4269237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp2952736 
End bp2953860 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content66% 
IMG OID638127363 
Product2-methylcitrate synthase 
Protein accessionYP_743434 
Protein GI114321751 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01800] 2-methylcitrate synthase/citrate synthase II 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.121252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.000290432 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGATA AGAAACTGGG CGGTGCCGGC CTGCGCGGCC AGTCCGCTGG CCAGACCGCG 
CTGTGTACCG TGGGCAAGGG CTCCGGCCTG ACCTACCGCG GCTACGATGT CCGCGAACTG
GCCGAAGGCG CCACCTTCGA AGAGGTGGCC TACCTGCTGT TGAAGGGTGA TCTGCCCACC
AAGGCGGAGC TTGCGGCTTA CACCGAGAAA CTGAAGGGCA TGCGCGATCT GCCCGATGCG
CTGAAGGCCG TGCTCGAGCA GATCCCGGCC GACGCCCACC CCATGGACGT AATGCGCACC
GGCGCCTCCA TGCTGGGTAA CCTGGAGACC GAGCAGAGCT TCGATGAGCA GCAGGAGGCC
ACCGACCGCC TGCTGGCCGT GCTGCCCGGG ATCATCACCT ACTGGTACCG CTACAGCCAC
GACGGCGTGC GCATCGACAC GGCCACCGAC GATGACTCCA TCGGTGCGCA TTTCCTGCAC
CTGCTGCGGG ACGAGAAGCC CAACAGCCTG CACGAGAAGG TGATGCACGC CTCGCTGATC
CTCTATGCGG AGCACGAGTT CAACGCCTCC ACCTTCACCG CCCGGGTCTG CGCCTCCACC
CTGTCCGACA TCCACTCCTG CGTCACCGGC GCCATCGGCT CCCTGCGCGG CCCGCTGCAT
GGCGGCGCCA ACGAGGCGGC CATGGCCATG ATCGAGCAGT GGAACAGCCC GGACGAGGCC
GAGCGCGAGC TCAAGGGCAT GCTCGAGCGC AAGGAGAAGG TGATGGGCTT CGGCCACGCC
ATCTACCGCG TCTCCGACCC TCGCAACGAG ATCATCAAGG CCTGGTCCAA GAAGCTGGCC
GACGAGGTGG GCGACACCGT GCTCTACCCG GTCTCCGAGC GGGTGGAGCA GGTGATGTGG
GACGAGAAGA AGCTCTTCCC CAACGCCGAT TTCTACCACG CCTCCGCCTA CCACTTCATG
GGCATCCCCA CCAAGCTGTT CACCCCCATC TTCGTGATGT CGCGGGTCAC CGGCTGGTGT
GCCCACGTTT TCGAGCAGCG GGCCAACAAC CGCATCATCC GCCCGAGCGC GGACTACACC
GGCCCCGAGG AGCGGCCCTT CACCCCCATC GATCAACGGG GCTGA
 
Protein sequence
MSDKKLGGAG LRGQSAGQTA LCTVGKGSGL TYRGYDVREL AEGATFEEVA YLLLKGDLPT 
KAELAAYTEK LKGMRDLPDA LKAVLEQIPA DAHPMDVMRT GASMLGNLET EQSFDEQQEA
TDRLLAVLPG IITYWYRYSH DGVRIDTATD DDSIGAHFLH LLRDEKPNSL HEKVMHASLI
LYAEHEFNAS TFTARVCAST LSDIHSCVTG AIGSLRGPLH GGANEAAMAM IEQWNSPDEA
ERELKGMLER KEKVMGFGHA IYRVSDPRNE IIKAWSKKLA DEVGDTVLYP VSERVEQVMW
DEKKLFPNAD FYHASAYHFM GIPTKLFTPI FVMSRVTGWC AHVFEQRANN RIIRPSADYT
GPEERPFTPI DQRG