Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_2568 |
Symbol | |
ID | 4269671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | - |
Start bp | 2908951 |
End bp | 2910231 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638127327 |
Product | C-terminal processing peptidase-3 |
Protein accession | YP_743398 |
Protein GI | 114321715 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.257628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.00928405 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCATGA TTCGACCGCT CTATTCTACC GCCATACTGC TGATCCTGGC CGCCGGGCTG GGGTTGGGGC AGACCGTATG GGCGGAGCGG CAACAGGCCA ACGCGGATCT GCCGTTGGAA GAGCTTCAGG CCGTCGCCGA GGTCTACGCG CGGATTCGCA GCCACTACGT GGACGAGGTG GATGACAAGG CGCTCCTGGA GGCGGCCGTG CGCGGCATGG TCAGCAGTCT GGACCCCCAC TCCACCTTTC TGGATTCCAG CGAGTTCCAG GCCCTGCAGG AGGGCACCCG CGGTGAGTTC GGCGGGCTGG GTATCGAGGT GGGCCAGGAG GACGGCTTCA TCAAGGTCAT CGCGCCCATC GATGACACCC CCGCGAGCCG TGCCGGCCTG CGTCCGGGGG ACCTGATCAC CCGCATCGAC GATAAACCGG TCAAAGGGAT GTCGTTGACG GAGGCGGTCA AGCAGATGCG CGGTGAGCCG GGCAGCCAGA TAACTCTCAC CGTGGTGCGC GAAGGCGAGG ATCGCCCGCT GACCTTCGAG ATCACCCGCG CCGTTATCCA GGTGGAGAGC GTGCGGGCCC GGATGCTGGA GCCCGGCTAC GGCTATCTGC GCATCAGCCA GTTCCAGGAG CGCACCGGTC GTGACGTGCG GGAAGCGCTC AGCGAACTGA AGCGGGAGGC CGACGGCAGC CTGCGCGGTC TGGTTCTGGA TCTGCGCAAC AACCCCGGTG GGGTGCTGGA CGGTGCGGTC AGTGTCGCCG ACGTCTTTCT CAGCAACGGC CGGATCGTCT ACACCGAGGG CCGGGACGAG CGCGCGGAGA TGAGCTTTAG CGCCACCCCG GTGGATATGC TGCACGGCGC CCCGCTGGTG GTGCTGGTCA ACCAGGGGTC CGCCTCCGCC TCGGAGATCG TCGCCGGGGC CCTGCAGGAT CATGGACGCG CGGTGGTCAT GGGGTCACCC ACCTTTGGCA AGGGCTCGGT GCAGAGCATC CTGCCGCTGG GCCGCGGTGC GGCGGTCAAG CTCACCACGG CGCGCTACTA CACCCCGGGC GGTCGCTCCA TTCAGGATAA GGGCATCCAG CCCGATATCC TCTCCGAGGA GCTCAGGGTG GCCCGGGTGG AACGCGAGGA CATGAGCCCG GCCGAGCTGG AGCGCCACGG CCTGCGCCAA CGGCCGGACG TGGATCGGGA CGACGAGACC GAGAGCCTGG CGCAGCGCGA TTTCACGCTG TACGAAGCGC TGAACCTGCT GAAGGGCGTG GGTATCTTTA CCGGTCGCTG A
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Protein sequence | MRMIRPLYST AILLILAAGL GLGQTVWAER QQANADLPLE ELQAVAEVYA RIRSHYVDEV DDKALLEAAV RGMVSSLDPH STFLDSSEFQ ALQEGTRGEF GGLGIEVGQE DGFIKVIAPI DDTPASRAGL RPGDLITRID DKPVKGMSLT EAVKQMRGEP GSQITLTVVR EGEDRPLTFE ITRAVIQVES VRARMLEPGY GYLRISQFQE RTGRDVREAL SELKREADGS LRGLVLDLRN NPGGVLDGAV SVADVFLSNG RIVYTEGRDE RAEMSFSATP VDMLHGAPLV VLVNQGSASA SEIVAGALQD HGRAVVMGSP TFGKGSVQSI LPLGRGAAVK LTTARYYTPG GRSIQDKGIQ PDILSEELRV ARVEREDMSP AELERHGLRQ RPDVDRDDET ESLAQRDFTL YEALNLLKGV GIFTGR
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