| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2558 |
|---|
| Symbol | |
|---|
| ID | 4269661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 2900908 |
|---|
| End bp | 2903502 |
|---|
| Gene Length | 2595 bp |
|---|
| Protein Length | 864 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638127317 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_743388 |
|---|
| Protein GI | 114321705 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.111038 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.00562869 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCAGG ACAAACTGAC CACGAAATTC CAGATGGCCA TCGCCGATGC GCAGAGCTTG
GCCCTGGGCC GCGATCACCA GATGATCGAG CCTGTGCACC TGATGGCCGC ACTGCTGGAC
CAGGAGGGCG GCGTCGGCCA GTTGCTCTCC CGGGCCGGCG TTAACATCAA CCAGTTGCGC
ACCGAAATGG GCCGGGCCCT GGACCGGCTG CCCACGGTGG AGGGCAGCGC CGGCGAGGTG
CATGTCTCCA ACGAACTGGG CCGGCTGCTC AACCTCACCG ACAAACTGGC CCAGAAGCGC
AAGGACCAGT ACATCTCCAG CGAGCTCTTC GTGCTGGCGG CGGTGACCGA CAAGGGCCAG
CTCGGCGAAC TGCTGCGCGG CGCCGGCGCC ACCAAGGAGG CGGTGGAAAA GGCCATCGAA
GAGCTGCGCG GCGGCCAGTC GGTGGACGAC CCCAACGCCG AGGACCAGCG CCAGTCCCTG
GAGAAGTACA CCATCGACCT CACCGAGCGG GCCGAACAGG GCAAGCTGGA CCCGGTGATC
GGCCGCGACG AGGAGATCCG CCGCACCATC CAGGTGCTCT CCCGGCGCAC CAAGAACAAC
CCCGTGCTCA TCGGCGAGCC CGGCGTGGGC AAGACCGCCA TCGCCGAGGG CCTGGCCAAC
CGCATCATCA ACGGCGAGGT GCCGGAGGGC CTGAAGACCA AGCGCATCCT CTCGTTGGAC
ATGGCCGCGC TGATCGCCGG CGCCAAGTAC CGGGGCGAGT TCGAGGAGCG GCTGAAGGCC
GTGCTCAAAG ACCTGGCCAA GCAGGAGGGC CAGATCATCC TCTTTATCGA CGAGATCCAC
ACCATCGTCG GCGCCGGCAA GGCCGAGGGC GCCATGGACG CGGGCAACAT GCTCAAGCCC
GCCCTCGCCC GGGGCGAGCT GCACTGCATC GGCGCCACCA CCCTGGACGA GTACCGCAAG
CACATCGAAA AGGACGCCGC CCTGGAGCGC CGCTTCCAGA AGGTGCTGGT GGACGAGCCC
TCCGTGGAGG ACACCGTGGC CATCCTGCGC GGCCTCAAGG AGCGCTACGA AGTGCACCAC
GGGGTGGAGA TCACCGACCC GGCCATCGTG GCGGCGGCCC AGCTCTCCCA CCGCTACATC
ACCGACCGGC AACTGCCCGA CAAGGCCATC GACCTGGTGG ACGAGGCGGC CAGCCGGATC
AAGATGGAGA TCGACTCCAA GCCGGAGGAG ATGGACAGGC TGGAGCGGCG GCTGATCCAG
CTCAAGATCG AACGCGAAGC CCTGGCCAAG GAGGAGGACG ACGCCTCCCG CAAGCGCCTA
GACGCGCTGG AGGGCGAGAT CAACGAGCTG GAGGACGAGT ACAAGGCGCT GGAGGAGATC
TGGAACTCCG AGAAGGCCGC CGTGGAAGGC ACCCAGAGCA TCAAGGAGCA ACTGGAGCGC
GCCCGGCAAG AGCTGGATAC CGCCCGCCGG GCCGGCGACC TGGGGCGCAT GTCGGAGCTG
CAGTACGGCC GCATCCCGGA ACTGGAGCGG CAACTGGACC TGGCCCTGCA GGCGGAGATG
CACGACACCC AGTTGCTGCG CACCAGCGTG GGCACCGAGG AGATCGCCGA GGTGGTCTCC
CGCTGGACCG GCATCCCGGT GAGCAAGATG CTGGAGGGCG AGCGCGACAA GCTGCTGCGC
ATGGAGGAAG AGATCCGCAA GCGCGTGGTG GGTCAGGACG AGGCCGTGGC CGCCGTGGCC
AACGCCATCC GCCGCTCCCG GGCCGGGCTC TCCGACCCCA ACCGGCCCAA CGGCTCCTTC
CTCTTCCTGG GCCCCACCGG TGTCGGCAAG ACCGAGCTGT GCAAGGCGCT GGCCAGCTTC
CTCTTCGACA CCGAGGAGGC GATGATCCGC GTGGACATGT CTGAGTTCAT GGAGAAGCAC
GCCGTGGCCC GGTTGATCGG CGCGCCCCCC GGTTACGTGG GCTACGAGGA AGGGGGTTAT
CTCACCGAGC ATGTGCGGCG CAAGCCCTAC TCGGTGATCC TGCTGGACGA GGTGGAAAAG
GCCCACGCGG ACGTCTTCAA CGTGCTGCTG CAGGTACTGG ACGACGGCCG CCTGACCGAC
AGCCACGGCC GCACCGTGGA CTTCCGCAAC ACGGTGATCG TGATGACCTC CAACCTGGGC
TCGGACGTGA TCCAGCAGAT GGCGGGCGAG GAGCACTACC AGGAGATGCG CTCGGCCGTG
ATGGAGATCG TCGGTACCCA CTTCCGCCCG GAGTTCATCA ACCGGGTGGA CGAGGTGGTG
GTCTTCCACC CGCTGGGCCG CGAGCACATC CGCTCCATCA CCGACATCCA GCTGCGCCAG
CTCAACGCCC GTCTGGCGGA CAAGGAGCTG ACGCTGGAGG TCTCCGACGC GGCCAAGGAC
CAGTTGGGTG AGGCCGGCTT CGACCCGGTG TACGGGGCGC GGCCCCTGAA GCGGGTGTTG
CAGCAACGGC TGGAGAACGC CCTGGCCCAG CGGATACTGC GTGGGGAGTT TATGCCTGGG
GATAGTATTC GGGTGGATAC TGAGGGTGAT GGGTTGGCCT TTACCAAGGG TGCGCCGGCT
GTTAGTGAGG CTTGA
|
|---|
| Protein sequence | MRQDKLTTKF QMAIADAQSL ALGRDHQMIE PVHLMAALLD QEGGVGQLLS RAGVNINQLR
TEMGRALDRL PTVEGSAGEV HVSNELGRLL NLTDKLAQKR KDQYISSELF VLAAVTDKGQ
LGELLRGAGA TKEAVEKAIE ELRGGQSVDD PNAEDQRQSL EKYTIDLTER AEQGKLDPVI
GRDEEIRRTI QVLSRRTKNN PVLIGEPGVG KTAIAEGLAN RIINGEVPEG LKTKRILSLD
MAALIAGAKY RGEFEERLKA VLKDLAKQEG QIILFIDEIH TIVGAGKAEG AMDAGNMLKP
ALARGELHCI GATTLDEYRK HIEKDAALER RFQKVLVDEP SVEDTVAILR GLKERYEVHH
GVEITDPAIV AAAQLSHRYI TDRQLPDKAI DLVDEAASRI KMEIDSKPEE MDRLERRLIQ
LKIEREALAK EEDDASRKRL DALEGEINEL EDEYKALEEI WNSEKAAVEG TQSIKEQLER
ARQELDTARR AGDLGRMSEL QYGRIPELER QLDLALQAEM HDTQLLRTSV GTEEIAEVVS
RWTGIPVSKM LEGERDKLLR MEEEIRKRVV GQDEAVAAVA NAIRRSRAGL SDPNRPNGSF
LFLGPTGVGK TELCKALASF LFDTEEAMIR VDMSEFMEKH AVARLIGAPP GYVGYEEGGY
LTEHVRRKPY SVILLDEVEK AHADVFNVLL QVLDDGRLTD SHGRTVDFRN TVIVMTSNLG
SDVIQQMAGE EHYQEMRSAV MEIVGTHFRP EFINRVDEVV VFHPLGREHI RSITDIQLRQ
LNARLADKEL TLEVSDAAKD QLGEAGFDPV YGARPLKRVL QQRLENALAQ RILRGEFMPG
DSIRVDTEGD GLAFTKGAPA VSEA
|
|---|
| |