| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2552 |
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| Symbol | |
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| ID | 4270940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 2894913 |
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| End bp | 2895854 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638127311 |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | YP_743382 |
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| Protein GI | 114321699 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0920144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0397584 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCACTC GCATAGAACA CGACATCCTC ATCGACGAGC AGCAGACCGG TCAGCGGCTG
GACCAGGCCT TGGCCGCCCT GCTGCCGGAC TACTCCCGCA GCCGTATCCA GCAGTGGATC
CGCGAGGGGG CGGTCCGGCT GGAGGGCACC GCCCCCCGGC CGCGGGACAA AGTCGCTGCC
GGGCAACAGG TCACGATACG GGCCGAACTG GAGGAAGAGC AACGGGTCAG TGCCGAGCCG
ATCCCCCTGC GCATCCAGTA CGAGGACCGC CACCTGTTGG TCATAGACAA GCCCGCGGGC
CTGGTGGTTC ACCCCGGGGC CGGCAACCGC GAGGGCACCC TGCAGAACGC CCTGCTCCAC
CACGACCCGC AACTGGCCGA GCTGCCGCGG TCCGGCATCG TACACCGGCT CGACAAGGAC
ACCTCCGGGC TGATGGTGGT GGCGCGCAGC CTGGCCGCCC ACACCGCCCT GGTGGCCCAG
CTGCAGGCCC GCAGCGTCCG GCGCGAATAC CTGGCGCTGG TGAACGGCTG TCCGGTGGCC
GGCGGTACCG TGGAGGCCCC CATCGGTCGC CACCCGCGGG ACCGCAAACG CATGGCGGTG
GTCGAGCGCG GGCGCCCGGC CACCACCCAC TACCGGGTGG AGGAGCGCCT GGCCGCCCAC
ACCCTCCTGC GCTGCTTTCT CGAGACCGGA CGCACGCACC AGATCCGGGT GCACATGGCC
CATGCCGGCT ACCCGCTGGT GGGCGATCCC GTCTACGGCG GGCGGCTGCG GCTGCCGCCG
CGGGCCACCG AGGCGCAGCG CCAGGCCCTG CGCGCCTTCC AGCGCCAGGC CCTGCACGCC
GCCCGACTGG CCCTGGACCA CCCAGAGAGC GGCGAGCGCC TGAGCTGGGA GGCCCCCCTG
CCCGAAGACA TGGCCGCGCT GCTGGCCTGT CTGCGGTCCT GA
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| Protein sequence | MGTRIEHDIL IDEQQTGQRL DQALAALLPD YSRSRIQQWI REGAVRLEGT APRPRDKVAA
GQQVTIRAEL EEEQRVSAEP IPLRIQYEDR HLLVIDKPAG LVVHPGAGNR EGTLQNALLH
HDPQLAELPR SGIVHRLDKD TSGLMVVARS LAAHTALVAQ LQARSVRREY LALVNGCPVA
GGTVEAPIGR HPRDRKRMAV VERGRPATTH YRVEERLAAH TLLRCFLETG RTHQIRVHMA
HAGYPLVGDP VYGGRLRLPP RATEAQRQAL RAFQRQALHA ARLALDHPES GERLSWEAPL
PEDMAALLAC LRS
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