| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2551 |
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| Symbol | |
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| ID | 4270939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 2894078 |
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| End bp | 2894842 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638127310 |
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| Product | putative lipoprotein |
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| Protein accession | YP_743381 |
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| Protein GI | 114321698 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00873964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0420812 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGCA AGCCCTGGCT GTGGTCGCTG CTCCTGATCG TGCCGCTGTT GCTGGCCGGC
GGCTGTTCCT CCAACGGTCC GGAGCGCCAG GAGGAGCAGG CCACCGCGGA GGAACTCTAT
CAGCAGGCGC GGCGCCAGCT GGAGAATGGC AACTACACCA TGGCCGTGGA GACGCTGGAA
CGCCTCCAGG GGCGCTTCCC CTTTGGGCCC TTCGCCACCC AGGCGCAGCT GGATATCATC
TACGCCTATT ACCAGGCCGG TGAGCTGGAA TCGACCATCG CCGCCGCCGA CCGCTTCATG
CGGCTCTATC CCCGCGACCC GAACGTGGCG TACGCCCGGT ACATGCGTGG GCTGGCGAAC
GCGGGCGTTG GCGATGAGTT CTTCACCCGG GTTTTCAATC TCGACCGCAG TCTGCGCGAC
CCGCAACCGT TGCGTCGCGC CTTTGTGGAT TTCCGGGAGC TGATCCAGCG CCATCCGGAC
AGCGAATACG TGGACGACGC CCGAGAGCGG ATGCAGGAGA TCCGCGACCT GCTGGCGCGG
CACGAGATCT ACGTGGCGCG CTTCTACCTC CGGCGGGATG CGCCGGTGGC GGCGGTGGGC
CGTGCCCGCA CGGTGCTCCA GGAGTACCAG GGCACCGGAG CGGTGGAGGA CGCCCTGGAG
GTGCTGGTGG AGGCCTACGG GATGCTAGAG CTGGCGGACC TGCAGCAGGA CGTGCGCCGG
GTGATCGGCG AGAACTTCCC CGGCCACCCG TTGGCCGCCC AATGA
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| Protein sequence | MSRKPWLWSL LLIVPLLLAG GCSSNGPERQ EEQATAEELY QQARRQLENG NYTMAVETLE
RLQGRFPFGP FATQAQLDII YAYYQAGELE STIAAADRFM RLYPRDPNVA YARYMRGLAN
AGVGDEFFTR VFNLDRSLRD PQPLRRAFVD FRELIQRHPD SEYVDDARER MQEIRDLLAR
HEIYVARFYL RRDAPVAAVG RARTVLQEYQ GTGAVEDALE VLVEAYGMLE LADLQQDVRR
VIGENFPGHP LAAQ
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