Gene Mlg_2485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_2485 
Symbol 
ID4268426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp2824835 
End bp2825926 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content69% 
IMG OID638127243 
Productalpha/beta hydrolase fold 
Protein accessionYP_743315 
Protein GI114321632 
COG category[I] Lipid transport and metabolism 
COG ID[COG3243] Poly(3-hydroxyalkanoate) synthetase 
TIGRFAM ID[TIGR01836] poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0293375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTCAG GCCTACCCCC GGAACGCGGG GAAGACTCCC TTAACCCGTC AATGGCCGCT 
CTGCAGGCGG TCCTGGATGA GTGCGCGGCT CTGCAGCCGG TCACCGTGGG CGAGACCCCG
CGCACCGCCA TCCACACCCT GCCGCCCGCC ACCCTCTACC ATTACCCTCC GCCCGCCGAT
ACCCAAGCCC CGGAACCAGA GGCAAGGCGC CCGCTGCTGG TGCTCTACTC CCTGGTCAAC
CGCCCCTATC TACTGGACCT CTCTCCCCAG CGCTCATTGC TCCGGGGTCT GCGCGACAGC
GGCCTGCCGG TCTATTTGCT GGACTGGGGT CGGCCGGAGC CGGCCGACCG TTTTCTCGGG
CTGGACGACT ACCTCTGCGA CATCCTGCAT GAGGCGGTGA AGGAGGTGAG CCGCCGCCAT
GGCGGTCAGC CGGTGGACCT GCTGGGGGTC TGCCAGGGCG GTACCTTCTC GCTCTGCTAC
ACGGCCCTGC ACCCGGAGCG GATCGGGCGG CTTGCGACCC TGGTCACCCC CGTCGATTTC
CACTGCCCCG GGGACACCCT CGGCGCCCTG GCCCGGGAAC TGAACCTGGG GCTGGCGGTG
GAGACCCTGG GCAACATCCC CGCCGATCTG CTCAACCTGG TCTTTATCAG CCTCAAACCG
GCCGAACTAT TGTCCCGGCG CTACCTCCAG CAGCTCCCGC AGTTGCGCCA CAACCGCGAT
GCCCTGCAGG ACTTCCTGCG CATGGAGCGC TGGATGTACG ACAGCCCGGA CCTCAGCGGC
AGGGCCTTTC TGGAGTTCGT CCGCGAGTTC TATCAGGACA ACGCCCTGGC CCGCGGCACG
CTCACCATCG GCGGCCGCGA GGTGGACCCG ACCCGCATCC GGCAGCCGGT TTTCAACGCC
TACGCCACCG CGGATCACCT GGTACCCCCG GCCGCGGCCC GCGCCATGGG CACGCTGCTG
AGTAATGCCG ACTACCGGGA GGAGGCGGTG CCCGGGGGAC ACCTGGGGGT GATGCTGAGC
AAGAAGGCCC GACTGGGCCT GCACCAGCGC CTGCAGGATT GGCTGGCACA GCCCCTCCCA
GCGGCCCCAT AG
 
Protein sequence
MTSGLPPERG EDSLNPSMAA LQAVLDECAA LQPVTVGETP RTAIHTLPPA TLYHYPPPAD 
TQAPEPEARR PLLVLYSLVN RPYLLDLSPQ RSLLRGLRDS GLPVYLLDWG RPEPADRFLG
LDDYLCDILH EAVKEVSRRH GGQPVDLLGV CQGGTFSLCY TALHPERIGR LATLVTPVDF
HCPGDTLGAL ARELNLGLAV ETLGNIPADL LNLVFISLKP AELLSRRYLQ QLPQLRHNRD
ALQDFLRMER WMYDSPDLSG RAFLEFVREF YQDNALARGT LTIGGREVDP TRIRQPVFNA
YATADHLVPP AAARAMGTLL SNADYREEAV PGGHLGVMLS KKARLGLHQR LQDWLAQPLP
AAP