Gene Mlg_2478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_2478 
Symbol 
ID4268419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp2817886 
End bp2818497 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content66% 
IMG OID638127236 
Producthypothetical protein 
Protein accessionYP_743308 
Protein GI114321625 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1664] Integral membrane protein CcmA involved in cell shape determination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAACA AACGTGAAGC CCCCAAGGCC GCTCCAGGCC ACTTGGACGA TCCCCGTGAC 
GACACCACCG GCGAGCCTGT CTCGGTGCCG GTCGGCCGGA CGCGGCCCAC AGCGGTCATC
GGCCCCTCGA TCCATGTCGA CGGGGAAATC CGTGGTGACG AGGATCTGGT TGTTGAAGGC
AAAGTCAAAG GGAGTATCGA GGTCAAGAAC CATAGCGTCA CGGTTGGTGG TCAGGGTGAG
GTGCAGGCCG ATATCTACGC CCAGGTGATC TACCTCGACG GCGTCATGGA AGGTCAGTTG
GTGGCCTCCG AGCAGGTGGT CGTGCGTCGG AGTGCCCGGG TCCGCGGCAG CATCGCCTCG
CCTCGGGTCA CGTTGGAGGA TGGCGCCCGG TTCAATGGCT CCATCGATAT GGACGAGCAG
AGCGATGTGC TGGCCAGGAC CTTCCCCGGT GGCCGCGCCG GGGTAACGAC CGCATCGGGG
TCGGGGGGCG TGAAGCCCAA GGCCGCCACG GGGGCCGGGG CCAAGGTGCG CGCTCCCGAC
ACCGACGCTG ATGACGACGC TGCTGCCAAG GCTGAGAGCA ACCTCGGTTC GGACCAGGCG
GTGGGCCGCT AG
 
Protein sequence
MFNKREAPKA APGHLDDPRD DTTGEPVSVP VGRTRPTAVI GPSIHVDGEI RGDEDLVVEG 
KVKGSIEVKN HSVTVGGQGE VQADIYAQVI YLDGVMEGQL VASEQVVVRR SARVRGSIAS
PRVTLEDGAR FNGSIDMDEQ SDVLARTFPG GRAGVTTASG SGGVKPKAAT GAGAKVRAPD
TDADDDAAAK AESNLGSDQA VGR