| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2460 |
|---|
| Symbol | |
|---|
| ID | 4270201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 2794996 |
|---|
| End bp | 2795778 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638127218 |
|---|
| Product | 4-oxalocrotonate decarboxylase |
|---|
| Protein accession | YP_743290 |
|---|
| Protein GI | 114321607 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
|---|
| TIGRFAM ID | [TIGR03220] 2-oxopent-4-enoate hydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.768834 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.296337 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGCAG AGAAGATCGA CCACTACGGC GAGGCGCTGC ACCAGGCCCT GGTCAACAGC
GAGCCCGTGG AGCCCCTCAC CGAGCGCGAG CCGGAGCTGA CGCTGGACGA TGCCTATCAG
ATCCAGCTGC GCATGGTGCA GCGGCAGCTG GATGCGGGGC AGCGCGTGGT GGGCAAAAAG
ATTGGTGTCA CCAGCAAGGC GGTGCAGGAC ATGCTCAATG TGCACCAGCC GGACTTCGGC
CACCTGCTGG ACGGCATGGT GTACGGCCAG TCCAGCGCGG TGCCGGTCTC GCAGATGATC
CGGCCGAAGG CGGAGGGCGA GATCGCCTTT CTGCTGGGCC GCGATCTGGA GGGGCCCGGC
ATCACCAACG CCGATGTCCT CAGGGCCACC GAGCTGGTCA TGCCCTGTTT CGAGATCGTC
GATTCCCGGA TCCGGGACTG GCGCATCCGC ATCCAGGACA CGGTGGCCGA CAACGCCTCC
TGCGGGCTGC TGGTCCTGGG CGATTCCGGC GTCCCGCCCC GGGACCTGGA CCTGAGCCTG
TGCGGCCTCG TGCTGGAGCG CAACGGCGCG GTGGAGCAGA CCGGGGCCGG CGCCGCCGCG
ATGGGCTCGC CGGTCAACTG CGTCACCTGG CTGGCCAACA CCCTGGGCCG TCTCGGCATC
CCGCTGAAGG CCGGCGAGGT CATCCTCTCC GGGGCACTGA CCGCAATGGT GGATGCCCAC
CCCGGCGACA ACATGCGGGT CGCCATCGGC GGGCTGGGCT CTGTCTCCCT GCGCTTCGTT
TAA
|
|---|
| Protein sequence | MEAEKIDHYG EALHQALVNS EPVEPLTERE PELTLDDAYQ IQLRMVQRQL DAGQRVVGKK
IGVTSKAVQD MLNVHQPDFG HLLDGMVYGQ SSAVPVSQMI RPKAEGEIAF LLGRDLEGPG
ITNADVLRAT ELVMPCFEIV DSRIRDWRIR IQDTVADNAS CGLLVLGDSG VPPRDLDLSL
CGLVLERNGA VEQTGAGAAA MGSPVNCVTW LANTLGRLGI PLKAGEVILS GALTAMVDAH
PGDNMRVAIG GLGSVSLRFV
|
|---|
| |