| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2451 |
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| Symbol | |
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| ID | 4268757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 2783702 |
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| End bp | 2786110 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638127209 |
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| Product | periplasmic sensor diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_743281 |
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| Protein GI | 114321598 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.312082 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCC TGCCGATCAT CCTGAGCGCC CTGCTGACGC TGCCCGCCAC CCTCGGCTGG
GCCGCCCCCG CGGGGGCCGA CGGCACGGAA TACCGCCTGG GGGCGTTGGG CTTTCGTGCA
CCGGAACAGA CGCTCGCCCG CTGGCAGGCC ACCGCCGATT ACCTCACCGA GACCATTCCC
GACGCCCGCT TCCGCGTCGC GCCGATGAAC TACCCCCAAC TGGAGGCCGC CATCGCCGAC
GGGACGGTGG ACTTCGTGCT CACCAACACC GGTCACTATG TGCGCATGGA GGCCGAGCAC
GGACTGACCC GCCTGGTCAC CATGATCGCC GAGGCAGAGC AGCAGCCGGT GCGCGTCTTC
GGCGGGGTCA TCCTGACCCG CGCCGACCGG CACGACATCC AGACCCTCTC CGACCTGGCC
GGCCGGCACG TCTACGCCGT CGGCGAGGGG TCGCTGGGGG GCTGGCACGT GGGCCGGGAG
GCCCTGCTGG ACGTCGGGGT CGACCCGGCC CGGGATCTCG CCCGGGTGAC CTTCACCGGC
ATGCCCCACG ACCAGGTGGT GGAGGCGGTG CTGGCCGGTG AGGGCGATGC GGGAATGGTG
CGCACGGGGA TACTCGAGAG CATGGCCCGG GAGGGCCGCC TGGACCTGGA CGCGGTGCGG
GTGCTCGAGC CACGCCGGAC GGCGGGTTTC CCCCTCCAAC ACTCCACCCA CCTTTACCCG
GAATGGCCCT TCTCCCGGCT CCCGCACACC CCGGACGCGA TCGCGCAGGC CGTGACCATC
GCCCTGTTGG AGATGCCGTC CGGGCATCCG GCCGCCCGGG ACGGTGGTTA TGTCGGCTGG
TCGGCCCCCC TCTCCTACGG GGGCGTCCAC GAGCTCTTTC AACGCCTGGG TGAACCGCCC
TACGAGCACT GGGGCGGCCT GGACCTGCGC GTGGTCTGGG AGCAGCACCC GGCCATCGTC
CTGGCCCTGA TGCTGATCGT CACCGGCGGC ATGGCCGGTG CCGTCATCAA ATACCGCCGA
CTCAACCGCA GCCTGGCGGT GGAGGTGGAC CAGCGCCGGA TGGTCGAACG GCAGCTGCGC
CAGCACCAGG CGCGGCTCAC CCACTTGGCT AATCACGACC CGCTCACCGA TCTGCCCAAC
CGGCTGTTGC TCACCACCCG ACTGGAGCAG GCGGTTGCCC GCGCCACCGG TAGCGGACAA
CGGGTGGCGG TGCTGTTCCT GGACCTGGAC CGCTTCAAGA ACATCAACGA CAGTCTGGGC
CACGCGGTGG GCGACGACCT GCTGCGGATC CTTGCCGAAC GCCTGCGCAG CCAGGTGGAG
GCCAACACCG TGGCCCGGCT AGGCGGGGAT GAGTTCATCG TGCTGCTGGA CGGCATCAGC
GATCTCGAAC TGGTGGACCA GCAGGCGCGG GAGCTGCTTG AGCTGGTGGC CGAGTCCTTC
TCCGTCGGGG GCTGGCGATC GCTGCAGGTG GGCGGCAGCA TCGGCATCAG CCTCTTTCCG
GACAACGCGC AGGATGCCTC CGAGCTCATC ACCCAGGCCG ACGCCGCCAT GTACCTGGCC
AAGGCCGAAG GTCGCAACAC CTACCGCTAC TACAACCAAT CGCTCACCGC CGCCGCCAGC
GAACGGCTGG AGACCGAGAC CCGCTTGCGC CGCGCCCTGG AACTGGACCA CCTGGAGGTC
TTCTATCAGC CCCAGCTGGA CATCACCACC GGGGCACTCA CCGGCGTGGA GGCACTGGTG
CGCTGGCGCG ACCCCGAGCA GGGCCTGATA CCGCCGGACC GCTTCATCCC GGTGGCAGAG
GAGACCGGGT TGATTGACCG GCTCGGCCAG CAGGTGCTCG AGCGCGCTTG CCTTCAGGTG
GCGGCCTGGG ACCGGGACGG CCTCCCGGCC CTGGATGTTG CGGTCAATCT CTCGGCCCAC
CAGATCGGCG ATCCGCGCCT GTGCGCCAAG ATCCGCCATG CCCTGGAGCG CAGCGGACTC
GCTCCCCGGC GGCTGGTGCT GGAGATCACC GAAAGCACAC TGATGACCCA GGCGGAGGGT
GCGCTCGGCA CGTTGGCCGG GCTGAAGGGC CTGGGGGTGC AAGTGGCCAT TGACGACTTC
GGCACCGGTT ACTCCTCCCT GGCCTATCTC AAGCGCTTTG CCATCGACTG GCTGAAGGTG
GACCGCTGCT TCGTACAGGA CCTGCCGGAA GACCGCAACG ACGCCGAGCT GACTCAGACC
ATCGTCTACA TGGCCCACAA CCTCGGCCTG CGGGTGCTGG CTGAGGGGGT GGAGACCCAG
GCGCAACTGG ATTTTCTCAC CCACCTCGGC TGCGATGGCT GGCAGGGCTT TCTCTGCAGC
CCGCCCCTGC CCCCGCAAGA ACTGGTGGCG CGCCTGGAAA GCAGAGAGGG GCTGCGCCGC
CGCGCGTGA
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| Protein sequence | MKALPIILSA LLTLPATLGW AAPAGADGTE YRLGALGFRA PEQTLARWQA TADYLTETIP
DARFRVAPMN YPQLEAAIAD GTVDFVLTNT GHYVRMEAEH GLTRLVTMIA EAEQQPVRVF
GGVILTRADR HDIQTLSDLA GRHVYAVGEG SLGGWHVGRE ALLDVGVDPA RDLARVTFTG
MPHDQVVEAV LAGEGDAGMV RTGILESMAR EGRLDLDAVR VLEPRRTAGF PLQHSTHLYP
EWPFSRLPHT PDAIAQAVTI ALLEMPSGHP AARDGGYVGW SAPLSYGGVH ELFQRLGEPP
YEHWGGLDLR VVWEQHPAIV LALMLIVTGG MAGAVIKYRR LNRSLAVEVD QRRMVERQLR
QHQARLTHLA NHDPLTDLPN RLLLTTRLEQ AVARATGSGQ RVAVLFLDLD RFKNINDSLG
HAVGDDLLRI LAERLRSQVE ANTVARLGGD EFIVLLDGIS DLELVDQQAR ELLELVAESF
SVGGWRSLQV GGSIGISLFP DNAQDASELI TQADAAMYLA KAEGRNTYRY YNQSLTAAAS
ERLETETRLR RALELDHLEV FYQPQLDITT GALTGVEALV RWRDPEQGLI PPDRFIPVAE
ETGLIDRLGQ QVLERACLQV AAWDRDGLPA LDVAVNLSAH QIGDPRLCAK IRHALERSGL
APRRLVLEIT ESTLMTQAEG ALGTLAGLKG LGVQVAIDDF GTGYSSLAYL KRFAIDWLKV
DRCFVQDLPE DRNDAELTQT IVYMAHNLGL RVLAEGVETQ AQLDFLTHLG CDGWQGFLCS
PPLPPQELVA RLESREGLRR RA
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