| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2424 |
|---|
| Symbol | |
|---|
| ID | 4269489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 2753612 |
|---|
| End bp | 2755630 |
|---|
| Gene Length | 2019 bp |
|---|
| Protein Length | 672 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638127182 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_743254 |
|---|
| Protein GI | 114321571 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.0758588 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCATCC GCCTGGGGCA TCGCCCTGAC GCCTTGGCAC CATCGGCTGG TAGAATCCCA
GCCATGATCA CCCTCAAGGA CATCACCCTT TCCCGCGGCC CCGAGGAACT CCTCCACCAG
GCCAGTCTCA CCGTCTACCC GGGGCAGCGC CTCGGCCTGG TCGGTCCCAA CGGCTGCGGC
AAGAGCACCC TGTTCGCCCT GCTGCAGGGC GAGATCGGCC CGGACGCCGG CGAGGTGGGC
ATCCCCCGTG ATTGGCGTAT CGCCCATGTG GTCCAGGAGA CCCCGGCGCT GGCCAGCAGC
GCCCTGGACT ACGTGCTGGA TGGCCACCTG GAGCTGCGAG CACTCCAGGC GCGGCTGGCC
GAGGCGGAAG CGGCGGGCGA CGGCGAGGCC ATGGGGCAAC TGCACGCCCG CCTGGACGCC
ATCGACGGCT ACACCGCCGC CTCCCGGGCG GAGACCCTGC TGGAGGGGCT GGGTTTTGAC
GCCGCCGGGC GGGCCCGGCC GGTGAGCGAT TTCTCCGGCG GCTGGCGCAT GCGCCTCAAC
CTGGCCCGCG CGCTCATCCA GCCCTCCGAC CTGCTGCTGT TGGACGAGCC CACCAACCAC
CTGGACCTGG AGGCTGTGCT CTGGCTGGAG CAGTGGCTCT GCCAGTACCC GGGGGCGCTG
CTGCTCATCT CCCACGACCG CGACTTCCTC GACACCGTGG TCCAGGGCAT CGTCCACTTC
GATGGCCGGC GGCTGGTGCA CTATACGGGC GGCTACAGCG ACTTCGAAAA GCGCCGCGCC
GAGCGCCTGG CGCAACAGCA GGCCCAGTAC GAGAAGCAGC AGGCGGAGAT TGCCCATCTG
CACAAATTCA TCGACCGCTT CCGCGCCCAG GCCAACAAGG CCAAGGCGGC GCAGAGCCGT
ATCAAGGCGC TGGAGCGGAT GGAGCGCATC GCCCCGGCGC ACGTGGACGC GCCCTTCGAG
TTCCACTTCC CCGACCCGCC CCGGGCCGCC AACCCGCTGC TGGTGCTCGA CCGGGTGGAT
TTGGGCTATG GCGGTGACCC GGTCCTGCGC CGGATTCAGC TCTCGCTGCG CCCGGGGGAG
CGGATGGGCC TGCTGGGACC GAACGGGGCC GGCAAGTCCA CCTTCATCCG CGCCCTGGCC
GGCGAGTTGA AACCCCAGGC GGGCCAGATC ACCGGCAGTC AGGGGCTGGC CGTGGGCTAC
TTCGCCCAGC ATCAACTGGA GCAACTGGAT GGCCAGGCCT CGCCGCTGCT GCACCTGCAG
CGCCTGGCCC CGAAGGCGCA GGAACAGACC CTGCGCAACT TTATCGGCGG TTTCGGCTTC
TCCGGCGACG ATGCGGACCG TGCCGTGGCC CCCTTCAGCG GTGGTGAAAA GGCCCGCCTG
GTGCTGGCAC TGCTGGTCTG GCAGCGGCCC AACCTGTTGC TGTTGGACGA GCCCACCAAC
CACCTGGACC TGGAGATGCG CCACGCCCTG ACCGTCGCCT TGCAGGAATA CGAAGGCGCC
GTGGTCCTCG TCTCCCACGA CCGTCACCTG CTCACCACCA CCTGCGATGA GTACTACCTG
GTGGCCGAGG GCCGCGTCCG CCCGCTGGAC GGCGACCTGG AGACCTACCG CCAGTGGTTC
CTCGAATGGC GCGAGGCGCA GAAGGCCGTC AACGGCGTCG CCTCTGCCGG GACCGGGCCC
GCGCCTGATG GCGACGAACC GCGGCACGGG TCCTCCCCGG CGCACACGGC TGAATCGCGC
AAGGCCCAGC GCCGCGCCCA GGCGCGGCAA CGCGAGCAGC TTCGCCCGTT GCGTCGCAAG
GCCGAGCAGT TGGAGAAGGC GCTGGATGAA CTGAGCGGGG AGCTGGCTGA CGTGGAGAGG
GCCCTGGGTG AGCCCGCTTT GTACGAGGCA GCGGGCAAGG ACCGCCTGAC CGAACTGCTG
CACCGGCAGG GGGTGCTCAA GGCCCGCCAG GAGGCCTTGG AGGCGGACTG GATGGAGGCC
CTGGAGGCGT TGGAGGCGGC CGAGGCCGCG TTGGGTTGA
|
|---|
| Protein sequence | MRIRLGHRPD ALAPSAGRIP AMITLKDITL SRGPEELLHQ ASLTVYPGQR LGLVGPNGCG
KSTLFALLQG EIGPDAGEVG IPRDWRIAHV VQETPALASS ALDYVLDGHL ELRALQARLA
EAEAAGDGEA MGQLHARLDA IDGYTAASRA ETLLEGLGFD AAGRARPVSD FSGGWRMRLN
LARALIQPSD LLLLDEPTNH LDLEAVLWLE QWLCQYPGAL LLISHDRDFL DTVVQGIVHF
DGRRLVHYTG GYSDFEKRRA ERLAQQQAQY EKQQAEIAHL HKFIDRFRAQ ANKAKAAQSR
IKALERMERI APAHVDAPFE FHFPDPPRAA NPLLVLDRVD LGYGGDPVLR RIQLSLRPGE
RMGLLGPNGA GKSTFIRALA GELKPQAGQI TGSQGLAVGY FAQHQLEQLD GQASPLLHLQ
RLAPKAQEQT LRNFIGGFGF SGDDADRAVA PFSGGEKARL VLALLVWQRP NLLLLDEPTN
HLDLEMRHAL TVALQEYEGA VVLVSHDRHL LTTTCDEYYL VAEGRVRPLD GDLETYRQWF
LEWREAQKAV NGVASAGTGP APDGDEPRHG SSPAHTAESR KAQRRAQARQ REQLRPLRRK
AEQLEKALDE LSGELADVER ALGEPALYEA AGKDRLTELL HRQGVLKARQ EALEADWMEA
LEALEAAEAA LG
|
|---|
| |