| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2396 |
|---|
| Symbol | |
|---|
| ID | 4269393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 2720826 |
|---|
| End bp | 2722676 |
|---|
| Gene Length | 1851 bp |
|---|
| Protein Length | 616 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638127154 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_743226 |
|---|
| Protein GI | 114321543 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.00000510296 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCGT TAATCAAGAA TCGGGTTGGC CGGGTTGGCC TGGGTGCGAG CGTGGGCGCC
CTGCTGCTGG CAGCTAGCAC AGCGAGTCAC GGTGCAGGTA TCGTGGTCTT GCCCCAGGAT
ATCGAAGAGA ACGGCACGCA CAATGGGCTG CTGTTCGATA ATGGGGTCAT GCGGGTGAGC
GAGGAGGTCT CCACCTTCCC CATCATCTGG GTCGCCAATG CCGGTGAGGC CTCGGTGTCC
AAGATTGACA CCAACACCGG GGTGGAACTG GCGCGCTACT GGACCTTCTT CCCCGAGCAG
GCCAGCAGCT CCCCGTGGGG TGGCCCCGCG CCCTCCCGTA CCGCGGTGGA CAGCCGCGGG
AATGTCTATG TCGCCAACCG CCACTTTGAC GGACGGCCGC CCGCCGTGCT CAAGATCCTG
AATGAAGAGG CGGTGGACCA CGCGGGCGAC GGCCAGGTGA ACACCTCGCG CAACGAGGAT
GGCGAGGGGA TGATCGACCC GGACACCGAG ATGATGCCCC TGGAGGACAC CAACAACACC
GGCCGGGTGG ATCCGGAGGA CCTGCAGGAC GACCGGATCG CCTGGCACGT CACCGTGGGC
AATGACAACG ACTTGGGGCG CTCGCTGTGC ATCGACAACG ACGGTCAGAT CTGGCTGGGC
ATGTACAGGG GGCAGGCCTA CTACCAGCTG GACAGCGACA CCGGTCAGGT GCTGCAGGGG
CCAATCGACA CGGAAGGCCA TACCCCCTAT GGCTGTCTGG TGGATGGGGA CGGGATGCTC
TGGAGTGCTG CCCTCGGCAG TGACCTGGGC CAGCTGAATA CCAACACCGG GGAGTGGGTG
GCCAGACACA GTCATTCAGG GTTCGGGTCC AATTACGGGA TTGCCGTTTC CGACGACTAC
GTCTTCTTGG GCGTTAACCC CTTCATTCGC TTCAATAAGG CAACGGAGGA GTTCGATGAC
CCCAGTGACG ACAACATGAG CGTGCTGGGG ATCGCCTACG GTCCCGACGG CAATGTCGTG
GTGGGCGACT CCTCTGCCGG GGGCGTGGCC AAATACACCC CCGATGGCGA TCTGATCTGG
GAGTCCCCGG CGCAGGAGGA CACCGGGCAT GTGCGTGGCG TGGTGCTGGA CGCCAACGGC
GATGTCTGGG CCATTCACGT CAATCATGAC CGCCTGTCCA AGTACCGCGG CGAGGATGGC
GAGCCCCTCG GGGTCTTCCT CTCCGGTGCC GGGCCCTACA CCTATAGCGA TGCGACGGGC
CTGGGTACCC GGGGCCTCGG GCGTCGCACG GGCATCGGCC GGATCATTGT CGATGGCCAC
GTGCGAGAGG TGCTCGGCGC GGCCGGCGGC GGCACGGTGG CCGCGGCTCA GGTGGGTGGA
ACCCAGGAGG AGGACATTCC GGAGTACGTC TGGGCCGATA GCTGCGTCAG CATCACCGAG
TCCCCCGAGA ACGCGGAGAG TACCTACCGC ATCCGTGCCG CAGACTCTCT CGAGGCCCTG
GAAGCCGCCC CTTTCCAGGT CTTCACGCCC GGAGAGCCGC TGCCGGATGG CGTCGAGGGC
CGCTATGTGC AGATCGAGGT GGAGATGCGG GCCAACGATG ACGACGAGTC TGAGGTCTTC
CAGGGGCTCG CGGTGACCAC CGACGAGAGT GACTGCAACA CGGTCCTTGC CCAGGCCTTG
GACGGCGTGG TGGACGACCC CGACGACGAG GAGCATGAAC GGACCCGCCG GGGCTCCGCC
TGCAGCGTGA CCGGTACCGG TGCGGCGGGT CCCGCCGACC CGACCCTGCC GCTGCTGGCC
GTCCTGGCCC TGCTCGGCGC CCTGGTCGGC CGTCGCCGTC GCGCAGATTG A
|
|---|
| Protein sequence | MKPLIKNRVG RVGLGASVGA LLLAASTASH GAGIVVLPQD IEENGTHNGL LFDNGVMRVS
EEVSTFPIIW VANAGEASVS KIDTNTGVEL ARYWTFFPEQ ASSSPWGGPA PSRTAVDSRG
NVYVANRHFD GRPPAVLKIL NEEAVDHAGD GQVNTSRNED GEGMIDPDTE MMPLEDTNNT
GRVDPEDLQD DRIAWHVTVG NDNDLGRSLC IDNDGQIWLG MYRGQAYYQL DSDTGQVLQG
PIDTEGHTPY GCLVDGDGML WSAALGSDLG QLNTNTGEWV ARHSHSGFGS NYGIAVSDDY
VFLGVNPFIR FNKATEEFDD PSDDNMSVLG IAYGPDGNVV VGDSSAGGVA KYTPDGDLIW
ESPAQEDTGH VRGVVLDANG DVWAIHVNHD RLSKYRGEDG EPLGVFLSGA GPYTYSDATG
LGTRGLGRRT GIGRIIVDGH VREVLGAAGG GTVAAAQVGG TQEEDIPEYV WADSCVSITE
SPENAESTYR IRAADSLEAL EAAPFQVFTP GEPLPDGVEG RYVQIEVEMR ANDDDESEVF
QGLAVTTDES DCNTVLAQAL DGVVDDPDDE EHERTRRGSA CSVTGTGAAG PADPTLPLLA
VLALLGALVG RRRRAD
|
|---|
| |