| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2370 |
|---|
| Symbol | |
|---|
| ID | 4270709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 2689132 |
|---|
| End bp | 2690253 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638127128 |
|---|
| Product | capsular polysaccharide biosynthesis protein-like protein |
|---|
| Protein accession | YP_743200 |
|---|
| Protein GI | 114321517 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4421] Capsular polysaccharide biosynthesis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0553875 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.0113185 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCCCT GGGTCAGGGC CGTGGATCGG CTCCTGGGCA CCGATTTCAA TAGCCACCCG
GCCTGCGCCT GGCAGCCCAG CCCGGTGCCG TTGCACGCCA TCGAGCAGGC CGGCGACGGG
GCCGTGGACC AGGCCGTAAA CTGGCGGCAG ACGCCCCCCA TCGCGCCGGT TGGGGTGGGG
CGGGTGCGCC GGCCGTTGAT CCTGCTGCCG AGTCCGGCCC CGCAACTGGC GCATGACCCG
CTGCGGCGCC GCGCCGTCAT CCTCACCAGC GGCGGGCGGC CCGTGCGCTA TCCGAAGTCT
GCCCCGGCCC TGCGCCATCT GCTGCGCGGC GGTTGGCGCT ACAGTGCCCG GCTGGGCCGC
GCCGCCCGCC CGGCTGTCCG GCTGGGCACC GTCGCCGTCC TCGGCAACCA CGATCCCGGC
TGCAACAACT ACTACCACTG GTGGGCGGAC ACCCTCGCCG ACCTCTGGTT TCTGCGCGAG
TCCGGCGTGG ACCTGGGCCG GGTCGACAGC TTCCTGATGG CCTATGGCGG CTACCCCTGG
CAACAACAGT CCCTGGCCCT GTGCGGCATT GACCAGGAGC GGGTGGTGGC CTTTGCCGAC
CACCCCGCGC TGACCGCGGA GCAGGCGCTT GTACCGGTGC GGAGCAGGGG GAGTTGGGTG
TCGCCGGTCT GGCTGGCGAG GGCGCTGCGG GAGCTGACCG GGTGGCGGCC GCCGGCCGTC
ACCACCCCGG GCCGTCGCAT CTACCTGTCG CGGCGCGATG CCCCTCGCCG GCAGGCGGCC
AACGAGGCGG CGGTGGAGCG GCTGCTGGTG GATGAGTCGG GTTTCGAGAG TCACCAGTGC
AGCGGCCTGA GCGTGCCCCG CCAGCAGGCC TTGTTCGCCG ACGCCGAGGT CATCGTGGCG
CCCCACGGTG CGGCGCTCAC CAACCTCGTC TGGTGCCGCC CGGGTACCCG GGTGGTGGAA
CTGGTCCCCG AGGGCCACCG CAACCCCTGC TTCCGTGACC TGGCCGCCCA GTCCGGCCTG
GACTACCGCG CCATCCTCTG TCCGGCAACG GGTGCCGGGG GCGGCCTGAC TGCCGACATC
CAGGTGCCGC TGGCGCGCCT GCGAGAGGCA CTGGCCGGGT GA
|
|---|
| Protein sequence | MSPWVRAVDR LLGTDFNSHP ACAWQPSPVP LHAIEQAGDG AVDQAVNWRQ TPPIAPVGVG
RVRRPLILLP SPAPQLAHDP LRRRAVILTS GGRPVRYPKS APALRHLLRG GWRYSARLGR
AARPAVRLGT VAVLGNHDPG CNNYYHWWAD TLADLWFLRE SGVDLGRVDS FLMAYGGYPW
QQQSLALCGI DQERVVAFAD HPALTAEQAL VPVRSRGSWV SPVWLARALR ELTGWRPPAV
TTPGRRIYLS RRDAPRRQAA NEAAVERLLV DESGFESHQC SGLSVPRQQA LFADAEVIVA
PHGAALTNLV WCRPGTRVVE LVPEGHRNPC FRDLAAQSGL DYRAILCPAT GAGGGLTADI
QVPLARLREA LAG
|
|---|
| |