| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2301 |
|---|
| Symbol | |
|---|
| ID | 4268399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 2612546 |
|---|
| End bp | 2613859 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638127061 |
|---|
| Product | HipA domain-containing protein |
|---|
| Protein accession | YP_743133 |
|---|
| Protein GI | 114321450 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
|---|
| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.752319 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.112429 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCGGC GTCGGCGCCA CCCTCCGCTA CACGTCCTGC TGAACAACCG CCACGTCGGC
CAGCTCCAAA AGGCGGTGGA CGGTGCAATC AGTTTTACCT ACGAGCAAAA CTGGCTGGAC
TGGGACCACG CCCTACCCGT CTCGCTCTCC CTTCCCCTCC GCGAAGACCC CTACCGGGGT
GCACCGGTGG CGGCAGTGTT CGACAACCTC CTGCCCGATG CCGAGCCGCT CCGCCGCCGC
GTTGCCGAGC GCGTTGGCGC CGAGGGCACC GACGCCTACA GCCTGCTCTC AGCCATCGGC
CATGATTGCG TCGGTGCCCT GCAATTCGTC GGCCCCGACG CCCCGGCCCC CGGCGACACC
ACCCAAATTT CCGGCCAGGT CATTGACGAG GACGACATCG GGAGGCTGCT CCGGGGGCTG
GCCCAGGCCC CACTGGGGCT GGACCGCGAC GAGGCATTCC GGATCTCCAT TGCCGGGGTG
CAGGAGAAGA CCGCCCTGCT CCGGCATGAA GGCCGCTGGC TAAAACCCCA CGGCACAACC
CCGACCAGCC ACATCCTCAA GCCTCAGATC GGCCAGTTGC CGAACGGCAT CGACCTGTCC
AACAGCGTCG AGAACGAATA CTACTGCCTC AAACTGGCTG CCGCCTTCGG GTTGCCCGTC
AACAGGGCCG AGATCCACAC CTTTGGGCCC ACCCAAGCAC TCGTCGTCGA GCGCTTCGAT
CGCCACTGGA CCCACGACGG CCGCCTGCTC AGACTCCCGC AGGAGGACTG CTGCCAGGCC
CTATCCGTCC CGCCAACACG CAAGTACCAG ACCGAGGGTG GCCCCGGTAT CGTGCAACTT
CTTGAACTGC TCAACGGCAG CGACACCCCG GCCAAAGACC AGGCGACCGT CTTCAAGGCA
CAGATCTTCT TCTGGCTGAT CGGCGCTACC GACGGGCACG CAAAGAACTT CAGCCTGTTT
CTGCGGCCAC AGGGCGCGTT TCGCCTGACC CCGCTGTACG ACATCCTGAC CGTCCAGCCG
AGCCTTGCCG GCCGGCAAAT CGAACGCAAG CAGATGAAAC TGGCCATGGC CGTGGGGCGC
GGAAACCGCT ACCGGATCCA TGAAATCCAG GGCCGCCATT TCCTACAGAC CGGCGCCGCC
GCCCGCCTGC CGCGCACCTT GGCCACCAAC GTCATCGAGG ACATAGTGAC CCGCGCGGAC
AACGCCATCA CGCAGGTCGA AAGCGCCTTG CCCCCCGACT TCCCCCCGGC AATCCACGAA
AGCGTGAAGG CGGCCATCGC CGGGCGCCTG GGGGTATTGC AGAGGGCGGG GTGA
|
|---|
| Protein sequence | MPRRRRHPPL HVLLNNRHVG QLQKAVDGAI SFTYEQNWLD WDHALPVSLS LPLREDPYRG
APVAAVFDNL LPDAEPLRRR VAERVGAEGT DAYSLLSAIG HDCVGALQFV GPDAPAPGDT
TQISGQVIDE DDIGRLLRGL AQAPLGLDRD EAFRISIAGV QEKTALLRHE GRWLKPHGTT
PTSHILKPQI GQLPNGIDLS NSVENEYYCL KLAAAFGLPV NRAEIHTFGP TQALVVERFD
RHWTHDGRLL RLPQEDCCQA LSVPPTRKYQ TEGGPGIVQL LELLNGSDTP AKDQATVFKA
QIFFWLIGAT DGHAKNFSLF LRPQGAFRLT PLYDILTVQP SLAGRQIERK QMKLAMAVGR
GNRYRIHEIQ GRHFLQTGAA ARLPRTLATN VIEDIVTRAD NAITQVESAL PPDFPPAIHE
SVKAAIAGRL GVLQRAG
|
|---|
| |