Gene Mlg_2298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_2298 
Symbol 
ID4268396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp2609445 
End bp2610575 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content62% 
IMG OID638127058 
Productputative transcriptional regulator 
Protein accessionYP_743130 
Protein GI114321447 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0550808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0348046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGTTCA AACCCTCCAC GGCGCAAAAT ACCGCGATCC GGAGGGCCAT CTGTGCATTC 
GCCAACGATC TTGATGGGCA GGGCGAGATC GGCGTGATCT TCGTGGGGCT CAACGATGAC
GGGACCTGCA AAGGGATCGA ACATCCAGAC CGCGACCAGA AGAAGCTATC CGACTGGGCC
TTGGGGGGCG ACATCCTCCC CCTTCCTGAC GTGGAAATCG GTTATCGCGA GCTGGACGGT
TGCCCTGTCA TAGTCGCCGA GATACGCCCC CACCAAGAAC CCCCGGTACG CTACCAGGGC
CAGGCGTGGG TCAGGGTTGG CACCACCAAC CGCCGCGCTA CTCCGGAACA GGAGAGACGT
TTGGCGGAGC GACGGCGGGG CGGAGACCTT CCCTTCGACC ATCGGCCGGC CCCCGGCGCC
AGTCTTGATG ACCTCGATCT GAGGTACTTC GAGCGCGAGT ACCTGCCCAA TGCCGTCGCA
CCGGAGGTCC TGGAAGAGAA CAACCGTAGC ATCGAAGATC AACTCAACGC CCTCAGGTTT
CTCACCCAGG GCCAAGTCAA CCACGGTGCT CTGCTCGTCC TGGGGCACGA CCCGACCGCC
TATATACCGG GGGCCTACGT GCAGTTCCTA CGCATCGACG GAACCGAGCT GGGCGACCCC
ATCAAGGACG AAAAGAGACT GACCGGCAAC CTGCCCGAGG TCATGGCGCA GCTGGACGAG
TTGTTGGAGG TGCACATCCA GGTTGCTGTC GACATCGAGG CCGGATCACG GGAGCAGCGC
CAGCCCGACT ACCCCGTTGT TGCCTTGCAG CAACTCACCC GGAACGCCCT CATCCATCGC
GCCTACGAAG GCAGCCACGC GCCGGTCCGC GTCTATTGGT TCAGAGACCG GGTGGAAATT
CAGAACCCCG GCGGACTCTA CGGCCAAGTC ACCACCGACA ACTTCGGTCA GGGTGTCACC
GATTACCGCA ACCCCCTGAT AGCAGAAGCC ATGCATATTC TCGGCTACGT ACAGAGATTC
GGGTTCGGCA TCCCATTGGC ACAGCGCCAC CTGCGGGAAA ACGGCAACCC CGACCCCGAT
TTTCAGTTCG CGCCAGAGTT CCTGGCCGTC ACCGTGAGGG CAGTGACGTG A
 
Protein sequence
MEFKPSTAQN TAIRRAICAF ANDLDGQGEI GVIFVGLNDD GTCKGIEHPD RDQKKLSDWA 
LGGDILPLPD VEIGYRELDG CPVIVAEIRP HQEPPVRYQG QAWVRVGTTN RRATPEQERR
LAERRRGGDL PFDHRPAPGA SLDDLDLRYF EREYLPNAVA PEVLEENNRS IEDQLNALRF
LTQGQVNHGA LLVLGHDPTA YIPGAYVQFL RIDGTELGDP IKDEKRLTGN LPEVMAQLDE
LLEVHIQVAV DIEAGSREQR QPDYPVVALQ QLTRNALIHR AYEGSHAPVR VYWFRDRVEI
QNPGGLYGQV TTDNFGQGVT DYRNPLIAEA MHILGYVQRF GFGIPLAQRH LRENGNPDPD
FQFAPEFLAV TVRAVT