| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2288 |
|---|
| Symbol | clpP |
|---|
| ID | 4268385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 2596514 |
|---|
| End bp | 2597158 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638127047 |
|---|
| Product | ATP-dependent Clp protease proteolytic subunit |
|---|
| Protein accession | YP_743120 |
|---|
| Protein GI | 114321437 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
|---|
| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.139562 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.536957 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATG AGCGCCGCGA GGGCCTGGCC CCGGAGATCG AGGCCACCGG CCTGGTGCCG
ATGGTGGTGG AGCAGTCCGC CCGGGGTGAG CGGGCGTACG ATATTTACTC CCGCCTGCTG
AAAGAACGGG TGATCTTCCT GGTCGGGCCG GTGGAGGACC ACATGGCCAA CCTGATCGTC
GCCCAGCTCC TGTTCCTGGA GTCGGAGAAC CCCGATAAGG ACATCCACAT CTACATCAAC
AGCCCGGGGG GCGCAGTGAC GGCGGGGCTG GCCATCTACG ACACCATGCA GTTCATCAAG
CCGGATGTCT CGACGGTGTG TATTGGTCAG GCCGCCAGCA TGGGCGCGCT GCTGCTCACC
GGCGGGACCA AGGGCAAGCG CTACGCGCTG CCCAACTCGC GGATGATGAT TCACCAGCCG
CTGGGCGGTT TCCAGGGCCA GGCCACCGAC GTGGATATCC ACGCCCGGGA GATCCTCGAC
ATGCGGGACC GGCTGAATCG CATCATGGCC CACCACACCG GTCAGGACAT GGAGACCATC
GCGCGGGACA CCGACCGCGA CAACTTCATG AGCCCGGACA CGGCCTGTGA GTACGGCCTG
GTGGACGCGG TGCTGGCCGA CCGCAAGGCG CTGGATCAGG CCTGA
|
|---|
| Protein sequence | MSDERREGLA PEIEATGLVP MVVEQSARGE RAYDIYSRLL KERVIFLVGP VEDHMANLIV
AQLLFLESEN PDKDIHIYIN SPGGAVTAGL AIYDTMQFIK PDVSTVCIGQ AASMGALLLT
GGTKGKRYAL PNSRMMIHQP LGGFQGQATD VDIHAREILD MRDRLNRIMA HHTGQDMETI
ARDTDRDNFM SPDTACEYGL VDAVLADRKA LDQA
|
|---|
| |