| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2276 |
|---|
| Symbol | |
|---|
| ID | 4268239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 2579486 |
|---|
| End bp | 2581741 |
|---|
| Gene Length | 2256 bp |
|---|
| Protein Length | 751 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638127033 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_743108 |
|---|
| Protein GI | 114321425 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACCC AACCAGGCAG TATCCCGTCC CGCCGTGCTA AACCCCGCGA CAACGCCTCC
CGAAATGGCC GGCCCCGGTG GTCACTGGGG CCGGCGGAAA GGGGCCCGCG GCGGCTCGGG
CTGTTGCTTG GGGCGGCCAT GTTGGGGTTC GCGGGGATGG GGCAGGCTGG TGTTGACTTG
GGGGCGGGTG GTGCTGACGG CCAGGCGGCC TACGGCCTGG CGCCGGTGGT TGTGACCGCG
CCGACCCGCA GCGAACGGGC ACGCCAGCGA AGCCCGGGTA GTGTGGAGGT CATCACCGCG
GAACAGCTCC AGCGCAGTGG GGCGACCCTT CTCGATGAGG CCCTGCGCAG CCACTCGGGT
ATCTTCGTGA GCGCGGATGG GACGGGGCAC TCGGTGCGCG GTGCGGCCCG GGAGGACACC
GTGATCCTGA TCGACGGTCG CCGGGTCCTC GGCGAGCCGA GCCGGCGCTA TGAACTGAAC
CGCATCCCCA CCCACCGCAT CGAGCGTATC GAGATCGTCA AGGGGCCGGG CAGTGTGCTC
TACGGCTCGG ACGCCCTGGG CGGGGTGATC AACATCGTGA CCCGGCGCCC CCGGCCGGGG
CTGCAAGGCA GTGTGGCTGT GCAGGCTGGC GCCCGGGCCC GGGACGGCGA GGCGGCGCGC
TATGACGTGG GGTTCAACCT GCTCGGCGGC AGTGCGGATA CCCAGTTCAC CCTTTTCGGG
GAGGCCAGCC ATCGGGATGG TTATCAACAG GAGGCGACCG CGCCGGTCCG TGTCGGCCCT
GCCGGAAACC GCGTGGCGCC ATCCAGCGAC GAGGCACCGG GCTGGGTGAA CCAGCTGGAT
CTGCCCGATG AGTACACCAT CGATGAGTTC CGCCGCGACG AGGCGGATGT CCATACCCTC
GGGGGCTCGC TGGAGCACTG GTTCAGCGAC CGGTTCAGCG TCCGCCTGGA CGCCAGCCAC
CTGTGGGAGG AGCGCCGCCG TGACTTCATC AATGCCGGCA GGACCAACAC CGCCCTGGCG
CATGACGACG GCTACCGCCC GGTCTTCAAC GTCCCGGTGC GCTGGCTCGA CGACAACCGG
CGCTGGGAGG TGGCCGCCAG TGCCGACTGG CAGGCGACGG CGGGCCTGGC CCTCAATCAC
CGTATCCACT ACAGCCGGTA TGAGAAAGAC CGCTCGGTGG CGGTCATCCC CTATCGGGAC
CTGGGGTTTG AGAGCCGGGA GGAGAGCGAC TTCCAGGGTC GTGATGTGAC GTTGATCGAG
TTGACCAACG AGTTCCTGAG CACCTGGACA CCGGTGGTCC GGCATACCGT GCAGGCGGGC
TTCGAGCACC GGGATCTCGA GTACAGGGAT AATGTGGAAG GCCAGGAGGA CAGCTCACGC
TGGCAGGCCG GGGTGTTTGC CCAGCACGAA TGGCAGGCCA CCGAGCGGCT GGACATCATC
TATGGGGCGC GCTTTGACGA TGCCTCGGTG GGGGGCGATA ACACCTCGGT GGAGGGCGGG
GTGGTGTACG CGCTGGCCCC GCAGGCGAGC CTGCGGGTGA ACTACGCCCA GGGCTTCAAG
TACCCGGACC TCAGAGCCCT GAGTGCCGAT ACCCGGACGC CGCGGGGTGA TTGGATGCTC
GGTGCTGATG TGATCCGCGA GGGCATCAAG GACGAGGCCC ACGCCCTTGC CCCGGAACAG
AGCGAGAACG TGGAACTCGG GGTCCGGGGC CACCTGGGGG ACCCGGCAGC GCTCCGCCTG
CGTTACGATT TCAGCGGCTT CTACACGGCG ATCGAGGATC GCATCGCCCG GGTCCGGGAA
ACGGACGAGT ACCGCACCTT CCGCAATATC GGCACCTCAC GGACCCGCGG CCTGGAGGCC
GCGCTGGAGA CCGACTGGTC GCCGCGTCTG GGCACCGACC TGACCGCCAC CTGGATCGAG
GACGCCTCGT GGGGCCGGGT CAGCCAGGCG CACTACCGGC ACCTGCCCAA CGCCCCTGAA
CTCACCGCCA TGGTCACGTT GCGCTGGCAG GCCACGCAGG CGCTGCATTT GCAGACCCGG
GCCCGCTATG TCGGGGCCTA TCACACCGCG GCGGACGACG ATGAGCGGCA GGCGAGCCAC
ACCCTGGTGG GCGTGAGCGC AAGCTACCGG CCTGCGGCCT GGCAGGGGGT GCGTCTCCAT
GCCGCCGTGG ACAACCTCTT CAACGAGGAT AATGACAGCT CTCTCTACGC CGACCCGGGG
CGTTTTCTGC GCGCCGGGGC GACGTACCAA TTCTGA
|
|---|
| Protein sequence | MSTQPGSIPS RRAKPRDNAS RNGRPRWSLG PAERGPRRLG LLLGAAMLGF AGMGQAGVDL
GAGGADGQAA YGLAPVVVTA PTRSERARQR SPGSVEVITA EQLQRSGATL LDEALRSHSG
IFVSADGTGH SVRGAAREDT VILIDGRRVL GEPSRRYELN RIPTHRIERI EIVKGPGSVL
YGSDALGGVI NIVTRRPRPG LQGSVAVQAG ARARDGEAAR YDVGFNLLGG SADTQFTLFG
EASHRDGYQQ EATAPVRVGP AGNRVAPSSD EAPGWVNQLD LPDEYTIDEF RRDEADVHTL
GGSLEHWFSD RFSVRLDASH LWEERRRDFI NAGRTNTALA HDDGYRPVFN VPVRWLDDNR
RWEVAASADW QATAGLALNH RIHYSRYEKD RSVAVIPYRD LGFESREESD FQGRDVTLIE
LTNEFLSTWT PVVRHTVQAG FEHRDLEYRD NVEGQEDSSR WQAGVFAQHE WQATERLDII
YGARFDDASV GGDNTSVEGG VVYALAPQAS LRVNYAQGFK YPDLRALSAD TRTPRGDWML
GADVIREGIK DEAHALAPEQ SENVELGVRG HLGDPAALRL RYDFSGFYTA IEDRIARVRE
TDEYRTFRNI GTSRTRGLEA ALETDWSPRL GTDLTATWIE DASWGRVSQA HYRHLPNAPE
LTAMVTLRWQ ATQALHLQTR ARYVGAYHTA ADDDERQASH TLVGVSASYR PAAWQGVRLH
AAVDNLFNED NDSSLYADPG RFLRAGATYQ F
|
|---|
| |