| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2257 |
|---|
| Symbol | |
|---|
| ID | 4269198 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 2558363 |
|---|
| End bp | 2559256 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638127014 |
|---|
| Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
|---|
| Protein accession | YP_743089 |
|---|
| Protein GI | 114321406 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase |
|---|
| TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.600446 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAAA CGCCAGAGGC CCTCTACGAG GCCAATCTCA AGTCCCTGGA GTGTCTGCAC
CAGGGCAAGG TACGGGACAT CTACGCGGTG GACGACCGGC GCATGCTGAT CGTCACCACC
GACCGCCTGT CCGCCTTTGA CGTCATCCTG CCCGACCCCA TCCCGGGCAA GGGCCAGGTG
CTGACGTCGG TCTCCAACTT CTGGTTCGAG CACACCCGTC ACATCATCGC CAACCACCTG
CTCGACGACC GCCCGGAAGA GGTCATCCCC GATCCGGCCG AACAGGCGCG GGTGGCCGGC
CGCGCGGTGG TGGTCCGGCG GGTCCGGCCG CTGCCTGTGG AGGCCATCGC CCGCGGCTAC
ATCATCGGCT CCGGCTGGAA GGACTATCAG GCCACCGGTC AGGTCTGCGG CATCCCGCTG
CCGCCGGGGC TACGCCAGGC CGACGCGCTG CCCGAGCCGA TCTTCACCCC CTCCACCAAG
GCCGCGGTGG GCGGGCACGA CGAAAACGTA CGCTTCGACG CGGTGGTGAA GGCCATCGGT
GCGCCGCTGG CCGAGCGCAT CCGCGAGGTG ACCCTGCGGC TCTACAGCGA GGCGGCGGCT
TACGCCCGCG AGCGCGGCAT CATCATCGCC GATACCAAGT TCGAGTTCGG GGTGGATGAG
GACGACAACC TGCTGCTGAT CGACGAGGCC CTGACGCCGG ACTCTTCCCG CTTCTGGCCG
GCGGACCAGT ACCGCCCGGG CAGCTCACCG CCCAGCTTCG ACAAGCAGTT CGTGCGCGAT
TACCTGGAAA CTTTGGACTG GGACAAGACC CCACCGGGGC CGCGTCTGCC GGAGGAGATT
CTGCGCCGCA CCGCCGAGAA ATACCGCGAA GCCCAGCGCC GGCTGCTGGG CTGA
|
|---|
| Protein sequence | MAETPEALYE ANLKSLECLH QGKVRDIYAV DDRRMLIVTT DRLSAFDVIL PDPIPGKGQV
LTSVSNFWFE HTRHIIANHL LDDRPEEVIP DPAEQARVAG RAVVVRRVRP LPVEAIARGY
IIGSGWKDYQ ATGQVCGIPL PPGLRQADAL PEPIFTPSTK AAVGGHDENV RFDAVVKAIG
APLAERIREV TLRLYSEAAA YARERGIIIA DTKFEFGVDE DDNLLLIDEA LTPDSSRFWP
ADQYRPGSSP PSFDKQFVRD YLETLDWDKT PPGPRLPEEI LRRTAEKYRE AQRRLLG
|
|---|
| |