| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2223 |
|---|
| Symbol | |
|---|
| ID | 4269438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 2527204 |
|---|
| End bp | 2528034 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638126979 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_743055 |
|---|
| Protein GI | 114321372 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.435588 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCCAG TGCAGGAAAC GAGTGATAAA CCGGTCTTGG CCCAGGTGCG CGGACTGCAT
TTCAGCCGCG GTGGCCGGCC TATTTTCAAT GGCGTGGATC TGGACATCCG CCAGGGCCAG
GTCACGGCCA TCATGGGACC GAGCGGTACC GGCAAGACCA CCCTGCTGAA ACTGATTGGG
GGGCAGCTCC AGCCCGCCGC CGGCCAGATT ACGGTGGAGG GCGAGGATGT GCACCGGCTG
CGCCGCGCCG AGCTCTACCG GCTGCGCCGG CGCATGGGCA TGCTGTTTCA GAGCGGGGCG
CTGTTCACCG ACCTGAACGT CTTTGAAAAC GTGGCCTACC CCATCCGGGA GCACACCCGC
CTGCCCGAGC CGCTGGTGCG GGACCTGGTC CTGATGAAGC TGGAGGCGGT GGGCCTGCGC
GGTGCCCGCG GACTGATGCC GGCGGAACTC TCCGGGGGCA TGGCCCGGCG CGTGGCCATG
GCCCGCGCCA TTGCCCTGGA CCCGCACCTG GTGATGTATG ACGAGCCCTT CACCGGACAG
GATCCGATCA CCATGGGCGT GTTGGTGGAC CTCATCCGCC GGCTCAACGA TGCCCTGGGG
CTGACCTCGG TGGTGGTCTC CCACGATGTG GCGGAGACCC TGAGCATCGC CGACTACGCC
TATGTGCTCT CCGGGGGGGA GGTGGTGGCC GAAGGCCCGC CGGAGGCGCT GCACCACAGT
GATAACGCCT GGTTGCGCCA GTTCCTCGAC GGGGCGCCGG ACGGCCCGGT GCCCTTCCAT
TACCCCGGTC GCACCCTGGC TGAAGACCTG CTGGAGCGTC CGGGACGATG A
|
|---|
| Protein sequence | MSPVQETSDK PVLAQVRGLH FSRGGRPIFN GVDLDIRQGQ VTAIMGPSGT GKTTLLKLIG
GQLQPAAGQI TVEGEDVHRL RRAELYRLRR RMGMLFQSGA LFTDLNVFEN VAYPIREHTR
LPEPLVRDLV LMKLEAVGLR GARGLMPAEL SGGMARRVAM ARAIALDPHL VMYDEPFTGQ
DPITMGVLVD LIRRLNDALG LTSVVVSHDV AETLSIADYA YVLSGGEVVA EGPPEALHHS
DNAWLRQFLD GAPDGPVPFH YPGRTLAEDL LERPGR
|
|---|
| |