Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_2186 |
Symbol | lpxC |
ID | 4270965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | - |
Start bp | 2490801 |
End bp | 2491718 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638126942 |
Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
Protein accession | YP_743018 |
Protein GI | 114321335 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00133982 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.348501 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGTC AGCGCACGTT AAAGAACAGT ATCCGCGCCA CTGGCGTGGG CTTGCACACC GGCGAGAAGG TGTACCTCAC CCTCCGACCG GCGCCGGCCA ACACCGGTAT TATCTTCCGA CGGGTGGATC TGGACCCGCC GGTGGATATC CCCGGCCATG CGCTGAACGT CGGGGATACC CGACTCTCCA CCTGCCTCTC CCAGGGGGAG GCGCGGGTCT ACACGGTGGA GCACCTGCTC TCCGCCATGG CCGGCCTGGG GATCGACAAC GCCTTCGTCG AGGTGAGCGC CCCGGAGGTG CCGATCATGG ACGGCAGTTC GGGGCCGTTC GTGTTCCTGA TCCGTTCTGC GGGCATCGAG GAACAGAATG CGCTGAAGCG GTTCATCCGG ATCCGCAAGC CGGTGCGGGT GGAGGAGGAC GACAAGTGGG CCGCCTTCGA GCCGTTCAAC GGGTTCAAGG TGGGCTACAC GCTGCATTTC GACCACCCGG TGTTCACCGA GCAAAACGGC TTCGCGGAAT TGGATTTCTC CAGCACCTCC TTCGTCAAGG AGGTGAGCCG TGCGCGCACG TTCGGCTTCA TGCGCGACAT CGAGATGCTG CGGGCCAACC GGCTGGCGCT GGGGGGCAGC CTGGACAACG CCATCCTGGT GGACGACTAC CGCATCCTCA ACGAAGACGG GCTGCGCTAT CAGGATGAGT TCGTCAAGCA CAAGATCCTG GATGCCATCG GCGATCTCTA CCTGCTGGGC CACAGCCTGA TCGGGGCCTT CAAGGGCCAT AAGTCCGGGC ACTCGCTGAA CAACAAGCTG TTGCGGGCGC TGCTGGCGCA GGAGGACGCC TGGGAGGAGG TCACCTTCGA TCAGGCCTCC GACTCGCCGA TCGCCTACGA TCGACCGGGG CTGGCGGTGG CCGGCTGA
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Protein sequence | MIRQRTLKNS IRATGVGLHT GEKVYLTLRP APANTGIIFR RVDLDPPVDI PGHALNVGDT RLSTCLSQGE ARVYTVEHLL SAMAGLGIDN AFVEVSAPEV PIMDGSSGPF VFLIRSAGIE EQNALKRFIR IRKPVRVEED DKWAAFEPFN GFKVGYTLHF DHPVFTEQNG FAELDFSSTS FVKEVSRART FGFMRDIEML RANRLALGGS LDNAILVDDY RILNEDGLRY QDEFVKHKIL DAIGDLYLLG HSLIGAFKGH KSGHSLNNKL LRALLAQEDA WEEVTFDQAS DSPIAYDRPG LAVAG
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