| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2176 |
|---|
| Symbol | |
|---|
| ID | 4270955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 2473745 |
|---|
| End bp | 2474776 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638126932 |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_743008 |
|---|
| Protein GI | 114321325 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
[COG4608] ABC-type oligopeptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.227134 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.196267 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGGA CCGCGAATGC CGTGCCATCG CCGCCCGACC GGCGGCGAGC GGGTGCGGGG
GAGACCCTGC TGGAGGCCCG CGACCTGCAC ACCTGGTTCG AACTGCGCCA GTGGGGCTTC
CTGCGGGTGG GCCATGTGCG CGCGGTGGAC GGGGTGAGCT TCGCCCTGCG CCGGGGCGAG
GCGGTGGCCT TCGTGGGCGA GAGCGGCTGC GGCAAGAGCT CCCTGGCCCG CACCCTGCTG
GGGTTGCACC GCCCCACCCG GGGGGAGGTG GTGTTCGAGG GGCGGCATCT GGAGGCGCTG
GATAAAGCCG GGTTGACGTC CTACCGGGCT CGGGTGGGCT ACGTGCAGCA GGACCCGTAT
GGCGCGCTGC CCCCCTTCAT GGACGTGGGC CGCATCCTGG AGGAGCCGTT GATCGTGCAC
GGGGTGCGCG ACCGGGTCGA GCGCCGTCGC CGGGTAAGGG CGGCGTTGGA GGAGGTGCGC
CTGTCGCCGC CGGAGGCCTA TCTGGGCAAG TTCCCCCACC AGCTCAGCGG CGGGCAGCAG
CAGCGCGTGG TGATCGCCCG GGCGCTGGTG CTGGCCCCGG CGCTGGTGAT CGCCGACGAG
CCGGTCTCCA TGCTGGACGC CTCGGTGCGG GTGGAGATCC TGCGCCTGCT GCGCCAGGTG
CAGACCGAGC GCGGCCTCAC CCTGGCCTTC ATCACCCACG ACCTGTCCAC CGTGCGCCAT
TTCGCCGAGC GCATCTTCGT GATGTATGGC GGCCGGGTGG TGGAGCAGGC GGCGGTGGAC
GAGCTGCTGG ATCACCCGCA GCACCCCTAC ACCCAGGCCC TGCTCAACGC CATCGCCGAC
CCGGACCCGG ACAACGCCGC CGAGGAGCGC CCGGTGCCGG CCGGCGAGGC CCCCAGCCTG
GCCAGTCCGC CGCCGGGGTG CCGTTTTCAC CCCCGCTGCC CGCACGCCAT GGCCGGGCTC
TGCGACGTGG AGGAGCCCCA CGACTTCGAG CCCCGGCGGG GGCATTACTC GGCCTGCTGG
CTGCACCGCT AG
|
|---|
| Protein sequence | MSRTANAVPS PPDRRRAGAG ETLLEARDLH TWFELRQWGF LRVGHVRAVD GVSFALRRGE
AVAFVGESGC GKSSLARTLL GLHRPTRGEV VFEGRHLEAL DKAGLTSYRA RVGYVQQDPY
GALPPFMDVG RILEEPLIVH GVRDRVERRR RVRAALEEVR LSPPEAYLGK FPHQLSGGQQ
QRVVIARALV LAPALVIADE PVSMLDASVR VEILRLLRQV QTERGLTLAF ITHDLSTVRH
FAERIFVMYG GRVVEQAAVD ELLDHPQHPY TQALLNAIAD PDPDNAAEER PVPAGEAPSL
ASPPPGCRFH PRCPHAMAGL CDVEEPHDFE PRRGHYSACW LHR
|
|---|
| |