| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2158 |
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| Symbol | |
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| ID | 4270153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 2453259 |
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| End bp | 2454197 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638126914 |
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| Product | type II secretion system protein |
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| Protein accession | YP_742990 |
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| Protein GI | 114321307 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.507846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0329173 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGTCT GGCTGTTCGT TGCCTCCCTG GTGTTGTTCG CGGCCGGGTT GGCCTTGGTG
GTCTGGCCCC TGTGGCGCCG CTCACAGGAG TACGGCCGTG TGGAGGGCCG GCTGATGGGC
ACCGCCCGGG GCGGCGGGCG GGATTGGGAT GAACCGGTGG ACGGGCGATC CGGCGCGCAC
ACCCTCTGGC GCCGGTTGGC GGCCGGACGC GGGGCCGCCC CAGCCCTCGC GCAGGACCCG
GTCTTGGCGC GCCGCCTTCG GCAGTGGGGT CTGCGGCGGG CCGGAGACCG GGCGGCGGTG
GCCCTGCTGG TCCAGGCGCT GCCCTGGGTG GTGGTGGCCG GCGGGCTGGG CTTTGTCTGG
ATCAGCCGCG GGGCCTTGAC CGGTGAGGAT GTCGGACTGC TGGCGTTGCT GGGCCTGGCC
GCGCTGTTCC TGCCCAAGCG GGTGGTGGCC GGTCTCGCCT CGGCGCGCCA GATGCGCATC
GGTGAACAGG TGACGACGGC CGTGCAGATC CTGCGCATGC TGCTGGATTC CGGCCAGTCG
GTGCAGCATG CCCTGGGCAT GGTGGCGGTG GAGGGCCGGG AGCTGATGCC GGACCTGAGC
CGGGAGCTCG ACCTGGCCCT GAACCGGGCC CGGAGTGGTG AGGGTCTGGT GGAGGTGCTC
GATGGCCTGG CCCGGGACCT GGAGGTACCG GAGCTGGACG ATACGGTGTT GATCTTGAAG
CAGGTGGTGG AGCAGGGCGG CAATGTGGAT GAGCCGCTGA CCCGGCTGGC GGAGTTGATC
AACGACCGGC AGCGTACCCG GACCCAGGAG AAGGTCACCA AGATGTCGGC CAAGATGAGC
GTGGTGATGA TGCTGTTTCT CTTCCCCGCC CTGCTGGTCG TCCTGGCAGC GCCCGGGCTC
ATCAGTCTGG TAGGGGCCCT GGGAGGTGTG GGTGACTGA
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| Protein sequence | MMVWLFVASL VLFAAGLALV VWPLWRRSQE YGRVEGRLMG TARGGGRDWD EPVDGRSGAH
TLWRRLAAGR GAAPALAQDP VLARRLRQWG LRRAGDRAAV ALLVQALPWV VVAGGLGFVW
ISRGALTGED VGLLALLGLA ALFLPKRVVA GLASARQMRI GEQVTTAVQI LRMLLDSGQS
VQHALGMVAV EGRELMPDLS RELDLALNRA RSGEGLVEVL DGLARDLEVP ELDDTVLILK
QVVEQGGNVD EPLTRLAELI NDRQRTRTQE KVTKMSAKMS VVMMLFLFPA LLVVLAAPGL
ISLVGALGGV GD
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