Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_2148 |
Symbol | |
ID | 4270143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | + |
Start bp | 2443190 |
End bp | 2444416 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638126904 |
Product | hypothetical protein |
Protein accession | YP_742980 |
Protein GI | 114321297 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0327906 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGACTGC CCGTTTCCAC CGCTTCGATC AGCAACGCCT TCGCCCTGCT GCGGGAGCAC AAGGTGCGCT CCGGGCTGAC GGTGCTCGGC ATCGCCGTGG GGATCTGGGC AGTGGTGACC CTGCTGGCCA TTGGCATGGG CGCACGGAGC TACATCGAGG GCCAGGTCCA GATCCTCGGC TCGGACCTGC TGGTGGTGAC GCCCGGTTCC TCGGAGGACC CCACCAGCTT CTTCAACCCG GTGATCATGG AGAGCCTGAC CCTGGCCGAT GCCGAGCATT TCCGCAACCG GATCCCGGAC GTCCACCGGG TGGCGGCCGT CTTTCAACTC AGCGGCGAAC TCAGCGTGGC CGACAAGCGG GCGGCCGGCA GCGTGGTGGG CACAGAGCCC GACTATTTCG CCCTCCGGGA GCTGAGCGTG GACACCGGCC GGCTCCTCAA CAGGGCGGAT CAGCGCTCCG CGGCACCGGT TGCCGTCCTC GGTGCGGAGC TCGCCCAGCA ATTGTTCGGC AACCAACCGC CGCTGGGCGA GTCCATCCGT TTCCGCGGGC AACCGTTGGA GGTGGTCGGG GTGCTCAGCC AACGGGACGA CGCGGCGCTG GGGCAGGGCG AGGACCGCAA CCTCTTCGTC CCCATCCGGT ATGCCCAGCG GGCCCTGGCT GGGGCCCACC ACGTGGAATA CATCATGGTG GAGCCCACCG GCCGTGAAAC CAAGGACGCA GTGGCCCGCG CCATCGATCT GCACCTGATG ACCCGCAAAT CCCGGCTCAG CAATGCCGGC AAGACCCACA CCGTGACCGA CTTTGGCGAG ATCGCGACCC TGGCCGGAAG GATTGTCGAC GCCATGACCT GGACCCTGGT CAGCATCGCC GGCGTCAGCC TGGTGGTCGG GGGGATCGGT GTGATGAACG TCATGCTGGC CTCGGTCAGC GAACGGGTCA GCGAGATCGG CATCCGGCGC GCGGTGGGGG CCAATGCCAA CCAGATCCGG CTGCAGTTTC TCTCCGAGGC GGCCATGCTC ACCGTGGTCG GGGGGGTGGT CGGGCTGTGC CTGGCCTTTA TTTCCATCCT CCTCGCCAAC CAGTTGCTGC CCTGGGAAGG GAGCCTGACG GTCACCTCGG TGCTGCTGGT CCTGCTCTTC TCAGCGAGTA TTGGCGGCTT CTTCGGCTAC TACCCGGCAC GTAAAGCGGC GAACATGCCA CCCATGGAGG CCTTGCGCTA TGACTGA
|
Protein sequence | MRLPVSTASI SNAFALLREH KVRSGLTVLG IAVGIWAVVT LLAIGMGARS YIEGQVQILG SDLLVVTPGS SEDPTSFFNP VIMESLTLAD AEHFRNRIPD VHRVAAVFQL SGELSVADKR AAGSVVGTEP DYFALRELSV DTGRLLNRAD QRSAAPVAVL GAELAQQLFG NQPPLGESIR FRGQPLEVVG VLSQRDDAAL GQGEDRNLFV PIRYAQRALA GAHHVEYIMV EPTGRETKDA VARAIDLHLM TRKSRLSNAG KTHTVTDFGE IATLAGRIVD AMTWTLVSIA GVSLVVGGIG VMNVMLASVS ERVSEIGIRR AVGANANQIR LQFLSEAAML TVVGGVVGLC LAFISILLAN QLLPWEGSLT VTSVLLVLLF SASIGGFFGY YPARKAANMP PMEALRYD
|
| |