Gene Mlg_2148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_2148 
Symbol 
ID4270143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp2443190 
End bp2444416 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content67% 
IMG OID638126904 
Producthypothetical protein 
Protein accessionYP_742980 
Protein GI114321297 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0327906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTGC CCGTTTCCAC CGCTTCGATC AGCAACGCCT TCGCCCTGCT GCGGGAGCAC 
AAGGTGCGCT CCGGGCTGAC GGTGCTCGGC ATCGCCGTGG GGATCTGGGC AGTGGTGACC
CTGCTGGCCA TTGGCATGGG CGCACGGAGC TACATCGAGG GCCAGGTCCA GATCCTCGGC
TCGGACCTGC TGGTGGTGAC GCCCGGTTCC TCGGAGGACC CCACCAGCTT CTTCAACCCG
GTGATCATGG AGAGCCTGAC CCTGGCCGAT GCCGAGCATT TCCGCAACCG GATCCCGGAC
GTCCACCGGG TGGCGGCCGT CTTTCAACTC AGCGGCGAAC TCAGCGTGGC CGACAAGCGG
GCGGCCGGCA GCGTGGTGGG CACAGAGCCC GACTATTTCG CCCTCCGGGA GCTGAGCGTG
GACACCGGCC GGCTCCTCAA CAGGGCGGAT CAGCGCTCCG CGGCACCGGT TGCCGTCCTC
GGTGCGGAGC TCGCCCAGCA ATTGTTCGGC AACCAACCGC CGCTGGGCGA GTCCATCCGT
TTCCGCGGGC AACCGTTGGA GGTGGTCGGG GTGCTCAGCC AACGGGACGA CGCGGCGCTG
GGGCAGGGCG AGGACCGCAA CCTCTTCGTC CCCATCCGGT ATGCCCAGCG GGCCCTGGCT
GGGGCCCACC ACGTGGAATA CATCATGGTG GAGCCCACCG GCCGTGAAAC CAAGGACGCA
GTGGCCCGCG CCATCGATCT GCACCTGATG ACCCGCAAAT CCCGGCTCAG CAATGCCGGC
AAGACCCACA CCGTGACCGA CTTTGGCGAG ATCGCGACCC TGGCCGGAAG GATTGTCGAC
GCCATGACCT GGACCCTGGT CAGCATCGCC GGCGTCAGCC TGGTGGTCGG GGGGATCGGT
GTGATGAACG TCATGCTGGC CTCGGTCAGC GAACGGGTCA GCGAGATCGG CATCCGGCGC
GCGGTGGGGG CCAATGCCAA CCAGATCCGG CTGCAGTTTC TCTCCGAGGC GGCCATGCTC
ACCGTGGTCG GGGGGGTGGT CGGGCTGTGC CTGGCCTTTA TTTCCATCCT CCTCGCCAAC
CAGTTGCTGC CCTGGGAAGG GAGCCTGACG GTCACCTCGG TGCTGCTGGT CCTGCTCTTC
TCAGCGAGTA TTGGCGGCTT CTTCGGCTAC TACCCGGCAC GTAAAGCGGC GAACATGCCA
CCCATGGAGG CCTTGCGCTA TGACTGA
 
Protein sequence
MRLPVSTASI SNAFALLREH KVRSGLTVLG IAVGIWAVVT LLAIGMGARS YIEGQVQILG 
SDLLVVTPGS SEDPTSFFNP VIMESLTLAD AEHFRNRIPD VHRVAAVFQL SGELSVADKR
AAGSVVGTEP DYFALRELSV DTGRLLNRAD QRSAAPVAVL GAELAQQLFG NQPPLGESIR
FRGQPLEVVG VLSQRDDAAL GQGEDRNLFV PIRYAQRALA GAHHVEYIMV EPTGRETKDA
VARAIDLHLM TRKSRLSNAG KTHTVTDFGE IATLAGRIVD AMTWTLVSIA GVSLVVGGIG
VMNVMLASVS ERVSEIGIRR AVGANANQIR LQFLSEAAML TVVGGVVGLC LAFISILLAN
QLLPWEGSLT VTSVLLVLLF SASIGGFFGY YPARKAANMP PMEALRYD