| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2135 |
|---|
| Symbol | |
|---|
| ID | 4269875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 2430812 |
|---|
| End bp | 2431750 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638126891 |
|---|
| Product | peptidase U32 |
|---|
| Protein accession | YP_742967 |
|---|
| Protein GI | 114321284 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0826] Collagenase and related proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.449129 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGGG AGCGAATGCC CATGCAAGTG ACCCTGGGGC CGGTGCCCTA TTACTGGCCG
GCCGAGCGCC TGAGCGCCTT CTACCAGTCG GTGGCCGACT GGCCGGTGGA TACCGTTTAT
CTGGGGGAGA CGGTGTGCAG CAAGCGCCGC GCCTTCAGCC TGGATGACTG GATCGGCTTG
GGCCGGGAGC TGCGCCAGGC CGGTAAGGCG GTGGTGCTCT CCAGCCTGGC GCTGGTGGAG
GCGCGTTCGG AGATGGGCGT GGTCCGGCGC CTGTGCGAGA ACGGCGAATT CCGGGTGGAG
GCCAACGACA TGGGGGCGGT GCAGTTGGCG CGGGAGGCGG GTGCCGCCTT CGTCGCCGGG
CCCACCCTGA ATGTCTACAA CCCCCGCACC CTGGCAGTGC TGCAATCGGC GGGGATGCGG
GTCTGGGTGC CCCCGGTGGA GATGCCGGAG GAGATGGTCC GCGACAATGT TGACGGACTG
GGGCAGGCGG CCGAGGGCCT GGAGGTCGAG GTTCAGGTCT TCGGCCCGCT ACCGCTGGCC
TGGTCGGCGC GGTGCTTTAC CGCCCGGGCG GTGGACCGGC CCAAGGATCA ATGCGGCTTT
CGCTGCCTGG AACACCCCAG CGGCCTGCCC ATGGCCACCC GGGACGGCGA TGAGTTCCTG
CGTATCAACG GCATCCAACT GCAGTCCGGC CGCTGGCTGC ACCTGCTGGA CGCCCTGGAC
TCCGTCCGCG ACGCGGGGGC CACCGCCATC CGTCTGAGTC CCTGGGGCGA GGATATGGCC
GCGGTAGTGC ACGCCTACGC GGCGGTCGCC GCGGGCCGGC CGGCGCCGGC CCTGATCCCG
GGACTGGACC CGGCGGCCTG TTGCGATGGC TACTGGTTCG GCGAGGCTGG CATGGCACGG
CTGGCTCGCC AGGCACAAGA GCAGGAGGAA CAGGTATGA
|
|---|
| Protein sequence | MMRERMPMQV TLGPVPYYWP AERLSAFYQS VADWPVDTVY LGETVCSKRR AFSLDDWIGL
GRELRQAGKA VVLSSLALVE ARSEMGVVRR LCENGEFRVE ANDMGAVQLA REAGAAFVAG
PTLNVYNPRT LAVLQSAGMR VWVPPVEMPE EMVRDNVDGL GQAAEGLEVE VQVFGPLPLA
WSARCFTARA VDRPKDQCGF RCLEHPSGLP MATRDGDEFL RINGIQLQSG RWLHLLDALD
SVRDAGATAI RLSPWGEDMA AVVHAYAAVA AGRPAPALIP GLDPAACCDG YWFGEAGMAR
LARQAQEQEE QV
|
|---|
| |