| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2132 |
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| Symbol | metH |
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| ID | 4269872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 2425553 |
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| End bp | 2429290 |
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| Gene Length | 3738 bp |
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| Protein Length | 1245 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638126888 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_742964 |
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| Protein GI | 114321281 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.638146 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTTCC CTTGCATTAG CCGCCGACGT AGCCACCAGA CCATGACCGA TTGCCGCAAG
ACCCTGGAAG ACGCCCTCGC CCGCCGGATC CTGATCCTGG ACTCGGGGAT GGGCACCATG
ATCCAGAACC GAAAGCTGGA GGAGGCCGAC TTCCGGGGCG AGCGCTTCGC CGACCACCCC
TGCGATCTCA AGGGCAACAA CGACCTGTTG GTGCTCACCC GTCCCGAGGT GATCCGCGAG
ATCCACGCGG AGAACCTGGC CGTGGGCGCG GACATCGTGG AGACCAACAC CTTCAGCTCC
ACCACCATCG CCCAGGCCGA CTACCGGATG GAGCACCTGG CCTACGAGAT GAACGTGGCC
GCCGCCCGGC TGGCCCGCGA GGCCTGCGAC GCCGCCGAGC GCGAAAACCC CGACCACCCG
CGCTACGTGG CCGGCGCCCT GGGCCCGACC AACCGCACCG CCTCCATCTC GCCGGACGTG
AACAACCCCG GCTACCGCAA CATCACCTTC GACCAGCTCC GCGCCGCCTA CCTGGAGGCA
GCGCGCGGCC TAGTGGAGGG CGGCGCCGAC CTGCTGCTGA TCGAGACCAT CTTCGACACC
CTCAACGCCA AGGCGGCCAT TTACGCCCTG GAGGAGCTGT TCGAAGAGAT CGGCCGGCGC
CTGCCGGTGA TGATCTCCGG CACCATCACC GACGCCTCCG GGCGCACCCT CTCCGGCCAG
ACCACCGAGG CCTTCTGGAA CTCAGTGCGC CACGCCAACC CCTTCACTGT GGGCCTCAAC
TGCGCCCTCG GTGCCGACCA GATGCGCCCC TTCGTGAAGG AGATCAGCCG GGTGGCGGAC
ACCTACGTCA CCATCTACCC TAACGCCGGC CTGCCCAACG AGTTCGGCGA GTACGACCAG
ACCCCCGAGG AGATGGCCGC CATCGTGCGC GAGTTCGCCG AGAGCGGCTT CGTCAACGTG
GTGGGCGGCT GCTGCGGCAC CACCCCCGAG CACATTGCGG CCCTGCGCGA GGCGGTGGCC
GACTGCGTCC CCCGCCCCAT CCCCGAACGG GAGCGGGCCA TGCGCCTGTC CGGCCTGGAG
CCCTTCAACG TGGGCAAGGA CAGCCTGTTC GTGAACGTGG GCGAGCGCAC CAACGTCACC
GGCTCCGCCC GCTTCCGCCG ACTGATCAAG GAAGAGGACT ACGACACCGC CCTGGAGGTG
GCCCGGGAGC AGGTGGAGAA CGGCGCGCAG ATCATCGACA TCAACATGGA CGAGGGCATG
CTCGATGCCC GCGCCTGCAT GGTGGACTTT CTCAACCTGA TCGCCGCCGA GCCGGACATC
GCCCGGGTTC CGGTGATGAT CGACGCCTCC AAGTGGGAGG TGCTGGAGGC GGGCCTGCAG
TGCCTGCAGG GCAAGGCGGT GGTCAACTCC ATCTCGCTGA AGGAGGGCGA GGCGCCCTTC
CTGGAGCAGG CGGAGAAGCT CAAGCGCTAC GGCGCCGCCG TGGTGGTGAT GGCCTTCGAC
GAGGACGGCC AGGCGGACAC CTACGCGCGC CGGATTGAGA TCTGCGAGCG GGCCTACCGG
CTGCTGGTGG ACCGGGCCGG CTTCCCGCCC GAGGACATCA TCTTCGACCC CAACGTCTTC
CCGGTGGCCA CCGGCATCCC GGAGCACGAC AACTACGGCA TCGACTTCAT CGAGGCCACC
CGCTGGATCA AGGCCAACCT GCCTTACGCC AAGGTCTCCG GCGGACTGTC CAACCTCTCT
TTCTCGTTCC GCGGCAACAA CGCCGTGCGC GAGGCCATGC ACTCCGCCTT CCTCTACCAC
GCCATCAAGG CGGGGCTGGA CATGGCCATC GTCAACGCCG GCCAGATCGA GGTCTACGAC
GACATCCCCA AGGACCTGCT GGAGCGGGTG GAGGACGTCA TCCTCAACCG CCGGGAGGAC
GCCACCGAGC GGCTGCTGGC GTTCGCCGAG TCGGTGAAGG ACCAGGGTGG CGCCAAGAAG
AAGGAAGCGG ATCTCGCCTG GCGCGAACTG CCGGTGAACA AGCGCCTGGA GCACGCCCTG
GTGAAGGGCA TCGTCGACTA CATCGACGAT GACGTGGAGG AGGCCCGCCA GGCCCACGAC
CGCCCCATCG AGGTGATCGA AGGCCCGCTC ATGGACGGCA TGAACGTGGT GGGCGATCTC
TTCGGCGAGG GCAAGATGTT CCTGCCCCAG GTGGTGAAGT CCGCCCGGGT GATGAAAAAG
GCGGTGGCCT ACCTGCTCCC CTATATCGAG GCGGAAAAGG CCGAAGGGGA CGACAAACCC
GCCGCTCACA TCCTGATGGC CACGGTGAAG GGCGACGTCC ACGACATCGG CAAGAACATC
GTCGGCGTGG TGCTCCAGTG CAACAACTTC AAGGTCACCG ACATCGGCGT GATGCAGCCG
GCGGAGGCCA TCCTGGAGAC CGCCGAGAAG GAAAAGGTGG ACATCATCGG CCTGTCCGGG
CTGATCACCC CCTCGCTGGA GGAGATGGCC AATGTGGCCA AGGAGATGCA GCGAAGGGGC
CTGACCCAGC CGCTGCTGAT CGGCGGTGCC ACCACCTCGC GGGTGCACAC GGCAGTGAAG
ATCGCCCCGC AGTATGACCA GGAGGTGATC TACGTTAAGG ACGCCTCGCG GGCGGTGGGC
GTGGCCTCCA ACCTGATGAG CGAGACCCGG CGCGAGGCCT ACGTGGCCGG CCTCCGCGAG
GAGTACGAGC GGGTGCGCCG GCAGCACGCC AACCGGCAGA AGAAGCAGAA GTGGGTCAAG
ATCGAGACCG CCCGCGCCAA CCGCACCCCC ATCGACTGGG ACGCCTTCGA GCCGGCCTTC
CCCAACGCAC CCGGCGTGCA TGTGCTGGAC GACTACCCGC TGGCGGAGCT GGTCGATTAC
ATCGACTGGA CGCCCTTCTT CAAGTCCTGG GAGCTGGCCG GCAGCTATCC GAAGATCCTC
GACGACGAGG TGGTGGGCGA ACAGGCGCGC ACGCTGTTCC ACGACGCCAA GGCGATGCTG
GCGCAGATCA TCGAGGAGCG CTGGTTGACC GCACGGGCGG TGTTCGGGCT GTTCCCCGCC
AACGGCGTGG GCGACGACAC CGAGCTCTAC GCCGATGAAG ACCGGGCGCA GGTACTGCTG
ACCCTGCACC ACCTGCGCCA GCAGACCGAG AAGCCGGAGG GCCGCCCCCA CCAGAGCCTG
GCCGACTTCA TCGCGCCGAA GGAGACCGGC AAGCCGGATC ACATCGGCGC CTTCGCGGTC
ACCACCGGCA TCGGCATCGA CGAGCATATC GCCCGCTTCG AGGCCGACCA CGACGACTAC
CACGCCATCC TGCTCAAGGC GCTGGCAGAC CGCCTGGCCG AGGCCTTCGC CGAGCGCCTG
CATGAGCGGG TGCGCAAGGA ATTCTGGGGC TACGCCCCGG ACGAGCAGCT CGACAACCGG
GGGCTGATCA AGGAGCACTA CCAGGGCATC CGGCCGGCCG CCGGCTACCC GGCCTGCCCG
GACCACACCG AGAAGGACCT GATCTGGGCG CTACTTGATG TTGACCAGCG GATCGGCCTG
ACCCTGACCG AGAGCAAGGC GATGGTGCCC ACGGCGGCGG TGAGCGGGCT CTATTTCGCC
CACCCGAAGA GCCGCTACTT CGGGATCGGC AAGATCTACC AGGACCAGGT GGAGGACTAC
GCCCGGCGCA AGGGCATGAG CCGCCGGGCG ATGGAGCGCT GGCTGGCCCC CAACCTGGGT
TACGAGCCGG AGGACTGA
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| Protein sequence | MRFPCISRRR SHQTMTDCRK TLEDALARRI LILDSGMGTM IQNRKLEEAD FRGERFADHP
CDLKGNNDLL VLTRPEVIRE IHAENLAVGA DIVETNTFSS TTIAQADYRM EHLAYEMNVA
AARLAREACD AAERENPDHP RYVAGALGPT NRTASISPDV NNPGYRNITF DQLRAAYLEA
ARGLVEGGAD LLLIETIFDT LNAKAAIYAL EELFEEIGRR LPVMISGTIT DASGRTLSGQ
TTEAFWNSVR HANPFTVGLN CALGADQMRP FVKEISRVAD TYVTIYPNAG LPNEFGEYDQ
TPEEMAAIVR EFAESGFVNV VGGCCGTTPE HIAALREAVA DCVPRPIPER ERAMRLSGLE
PFNVGKDSLF VNVGERTNVT GSARFRRLIK EEDYDTALEV AREQVENGAQ IIDINMDEGM
LDARACMVDF LNLIAAEPDI ARVPVMIDAS KWEVLEAGLQ CLQGKAVVNS ISLKEGEAPF
LEQAEKLKRY GAAVVVMAFD EDGQADTYAR RIEICERAYR LLVDRAGFPP EDIIFDPNVF
PVATGIPEHD NYGIDFIEAT RWIKANLPYA KVSGGLSNLS FSFRGNNAVR EAMHSAFLYH
AIKAGLDMAI VNAGQIEVYD DIPKDLLERV EDVILNRRED ATERLLAFAE SVKDQGGAKK
KEADLAWREL PVNKRLEHAL VKGIVDYIDD DVEEARQAHD RPIEVIEGPL MDGMNVVGDL
FGEGKMFLPQ VVKSARVMKK AVAYLLPYIE AEKAEGDDKP AAHILMATVK GDVHDIGKNI
VGVVLQCNNF KVTDIGVMQP AEAILETAEK EKVDIIGLSG LITPSLEEMA NVAKEMQRRG
LTQPLLIGGA TTSRVHTAVK IAPQYDQEVI YVKDASRAVG VASNLMSETR REAYVAGLRE
EYERVRRQHA NRQKKQKWVK IETARANRTP IDWDAFEPAF PNAPGVHVLD DYPLAELVDY
IDWTPFFKSW ELAGSYPKIL DDEVVGEQAR TLFHDAKAML AQIIEERWLT ARAVFGLFPA
NGVGDDTELY ADEDRAQVLL TLHHLRQQTE KPEGRPHQSL ADFIAPKETG KPDHIGAFAV
TTGIGIDEHI ARFEADHDDY HAILLKALAD RLAEAFAERL HERVRKEFWG YAPDEQLDNR
GLIKEHYQGI RPAAGYPACP DHTEKDLIWA LLDVDQRIGL TLTESKAMVP TAAVSGLYFA
HPKSRYFGIG KIYQDQVEDY ARRKGMSRRA MERWLAPNLG YEPED
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