| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2129 |
|---|
| Symbol | |
|---|
| ID | 4269869 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 2423214 |
|---|
| End bp | 2423903 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638126885 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_742961 |
|---|
| Protein GI | 114321278 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.101154 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.382383 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAAG CCTCCGACAC CAAGGAACGC ATTCTGGACA CGGCCGAGCG GCTGTTCGCC
GAGCGCGGCC TGGGGCAGAC CTCGCTGCGC CAGATCACGT CGCAGGCGGA GGTCAATCTG
GCCGCAGTTA ATTACCATTT TGGCTCCAAG CAGGGGCTGA TCAAGGCGGT GTTGGGGCGG
CGGCTGGAGC CATTGAACCG CGAGCGCATC CGCCGGTTGG ACCGGCTGGA ACGCGCCGGC
GAGCTCACCC TGGAGGGGCT GATTGAGGCC TTCATCGGCC CGCCGCTGGA ACTGAGCCGG
GACGGTGGCG GTGGCAGCCG GTTCGTGCGC CTGATGGGCC GTACCTATAC CGAGCACGCC
AGCTTCCTGC ACGACCACAT GCGCCAGGCC AACGAGGGGC TGGTCAGTCG TTTCAAGCCG
GCCTTCCGCC AGGTGCTGCC GGACTTACCC AAGGGCGAGC TCTACTGGCG CCTGCACTTC
ATGGTGGGGG TGATGTCCTA CGTCATGGCG GGCAACGACA TGATGCAGGT GCTGGCGGCG
AGCCGCAGCG CCAACCCGGA CGAGCCGCGG GAGATCATTC GGCGGGTGGT GCCCTTTCTG
GTGGGTGGGC TGCGCGCCCC GCTGCCCCCG GAGCTGCAGG AGGAGGCCAG CGAGGCGGGT
ACGACCGAGG TGGCCGCCGG CTCGGGCTGA
|
|---|
| Protein sequence | MAEASDTKER ILDTAERLFA ERGLGQTSLR QITSQAEVNL AAVNYHFGSK QGLIKAVLGR
RLEPLNRERI RRLDRLERAG ELTLEGLIEA FIGPPLELSR DGGGGSRFVR LMGRTYTEHA
SFLHDHMRQA NEGLVSRFKP AFRQVLPDLP KGELYWRLHF MVGVMSYVMA GNDMMQVLAA
SRSANPDEPR EIIRRVVPFL VGGLRAPLPP ELQEEASEAG TTEVAAGSG
|
|---|
| |