| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2127 |
|---|
| Symbol | |
|---|
| ID | 4269377 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 2418857 |
|---|
| End bp | 2420719 |
|---|
| Gene Length | 1863 bp |
|---|
| Protein Length | 620 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638126883 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_742959 |
|---|
| Protein GI | 114321276 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.148266 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.516077 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAGGAGA CCGTGGAGAA GACAACCGAC TACATCGAAC CGGGGGAGGC CGGCACCCTG
CACCGGCTGT TCCTGGAGCG GGTGCGGCGC AGCCCCGATG CGCCGGCCTA CCGTCAGTAC
GACTACGCCC ACCAGAGCTG GCGGACGTAC ACCTGGCGGG AGACCGCCGA GGCGGTCCGC
CGCTGGCAGG CGACCCTGGC CCGGGAGGGG CTGCAGCGCG GTGACACCGT GGCGGTGATG
CTGCCCAATG GCTGGCCGTG GGTGCTGTTC GACCAGGCGG CCCTGGCCCT GGGGCTGGTG
GTGGTGCCCC TCTACACCAG CGACCGGCCG GACAACGTGG CCTATATCCT GGAGGACAGC
GGGGCGCGGG TGCTGATCCT GGAGCAGGCG GAGACCTGGC AGGCCATCCA GCGGGGCGGC
CACCGGCTGA ACGCGGTGCA GCGGGTGGTG GTCACCCAGG GCGTGGCGCC GGCCGACAGC
AGGGGCACCG TGGTGGCGTT GGAGGCCTGG CTGGCGCCCG AGGGCGATCC CGGCGATCCG
CCCGAGCCGC CCCGCGACGG CCACGCCCTG GCCTCCATCG TCTATACCTC CGGCTCCACC
GGCCGGCCCA AGGGCGTGAT GCTCAGCCAC CGGAACATGC TGGAGAACGC CTACGCGGGC
CTGCAGCGCA TTGCCATCTA CCCAGACGAC CTGTTCCTCT CCTTCCTGCC GCTCTCCCAC
ACGCTGGAGC GGACCATCGG CTACTACCTG CCGATCATGA CCGGCTCCAC CGTGGCCTAC
GCCCGCTCGG TGCCCGATCT GCCCGAGGAC CTGGCCACCC ACCGGCCCAC CGCCCTGGTC
AGCGTGCCGC GCATCTACGA GCGGGTCTAC GGACGTATCC AGGAGGGCCT GAAGGCGAAG
TCGGGGCTGG CCCGCGCGCT GTTTCACAGC GCCGTCCGCG TCGGCTGGCA CCGCTACCAG
CGAGGCCAGG GCCTGTGCGG CTGGCACCCC AGGGAACTGG CCTGGCCGCT GCTCCACCGG
CTGGTGGCCG GCAAGGTGAC CGCCCGGCTG GGCGGCCGGG TGCGGGTGGC CATCAGCGGC
GGCGCCCCGC TGAGCCGGGA GGTGGCCCAG CTCTTCCTGT CACTGGGGGT GCCGGTGCTG
GAGGGCTACG GGCTCACCGA GTCGAGCCCG GTGATCTCGG TGAACACCCT GGAGGACAAC
CGCCCAGGCA CCGTCGGCAA ACCGCTGCCC GGGGTGGAGG TGCGCATCGG CGAGCAGGGC
GAGCTGCTGG CCCGAGGCCC CAACATCATG CTCGGCTACT GGAACAATCC CGAGGCCACG
GCGGCGGCAC TGGACCGCGA CGGCTGGCTG CACACCGGGG ATCAGGCCCG GCTGGATGAC
GAGGGCCGGA TCACCATCAC CGGCCGGCTC AAGGAGATCA TCGTCATGGC CAACGGCGAG
AAGGTGCCGC CGGCGGACAT GGAACTGGCC ATCGCCAACG ACCCGGTGTT CGAGCAGGTG
ATGGTGGTGG GCGAGGGCCG GCCCTACCTG GGGGCACTGG TGGTGCTGAA CGAGGCGGTC
TGGCCCAGCG TCGCCGGCGA GCACGGTCTG CCGGAGGCGG TGACCGCCGC CCGCGACGAT
CCGCGGGTGG AGCGCTACCT GCTGGAACGG GTCGGCCACC TGCTGCACGC CTTCCCCGGC
TATGCCCAGA TTCGCCGCCT GCGGGTCCTG CCCGAGCCCT GGAGCGTGGA CAACGCCATG
CTCACCCCCA CGCTTAAGCT CAAGCGCGCG CGGATCGCGG AGCACTTCCA GGATGAGCTG
GCCACCCTGT ACGCCGGGCA CGATACCCCG GGCGGCAGCG CCCGCCAGTC CGGTCAACAC
TGA
|
|---|
| Protein sequence | MEETVEKTTD YIEPGEAGTL HRLFLERVRR SPDAPAYRQY DYAHQSWRTY TWRETAEAVR
RWQATLAREG LQRGDTVAVM LPNGWPWVLF DQAALALGLV VVPLYTSDRP DNVAYILEDS
GARVLILEQA ETWQAIQRGG HRLNAVQRVV VTQGVAPADS RGTVVALEAW LAPEGDPGDP
PEPPRDGHAL ASIVYTSGST GRPKGVMLSH RNMLENAYAG LQRIAIYPDD LFLSFLPLSH
TLERTIGYYL PIMTGSTVAY ARSVPDLPED LATHRPTALV SVPRIYERVY GRIQEGLKAK
SGLARALFHS AVRVGWHRYQ RGQGLCGWHP RELAWPLLHR LVAGKVTARL GGRVRVAISG
GAPLSREVAQ LFLSLGVPVL EGYGLTESSP VISVNTLEDN RPGTVGKPLP GVEVRIGEQG
ELLARGPNIM LGYWNNPEAT AAALDRDGWL HTGDQARLDD EGRITITGRL KEIIVMANGE
KVPPADMELA IANDPVFEQV MVVGEGRPYL GALVVLNEAV WPSVAGEHGL PEAVTAARDD
PRVERYLLER VGHLLHAFPG YAQIRRLRVL PEPWSVDNAM LTPTLKLKRA RIAEHFQDEL
ATLYAGHDTP GGSARQSGQH
|
|---|
| |