| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2124 |
|---|
| Symbol | |
|---|
| ID | 4269374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 2412706 |
|---|
| End bp | 2415180 |
|---|
| Gene Length | 2475 bp |
|---|
| Protein Length | 824 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638126880 |
|---|
| Product | acyl-CoA dehydrogenase |
|---|
| Protein accession | YP_742956 |
|---|
| Protein GI | 114321273 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.441583 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTCA TCTTTGCGAT CGCGGTGGCC CTGGCGGGCT TTCTGGCCCT GGCTTATGCC
GGCGCACGGC TGCCGGTATG GACAGCGGCC GTGGCCCTCT ACCTGCTGGG CCTCTGGGTT
GTCGGCGCGG CGTCCGGCGC GGCGGTGGCT CTCGCCGCGC TGGTGTTGGC ACCGGTGGCG
TTACTGTTCA ACCTGCCGGC GTTGCGCCGG CGGGTGATCA CCCGGCCCCT GTTCCAGGCC
TTCAAGCGGG TGTTGCCGCC CATGACCACC ACCGAGCGCG AGGCCCTGGA GGCCGGGGAC
ACCTGGTGGG AAGGCGAGCT CTTCCAGGGC CGGCCGGACT GGCAGCGCCT GCGCGAGACC
CCGGTGACCC GGCTCAGCGA TGAGGAGCAG GCCTTTCTGG ATAACCAGGT GGCGACACTC
TGCCGGATGC TGGATAACGA CCGGATCGAG CGCGAGGCGC ACGATCTGCC CGCCGAGGTG
TGGGACTTCA TCCGCCGTGA GCGCTTCTTC AGCCTGATCA TCCCCAGGCA GTACGGCGGC
CGGGCGTTTT CCAGTTACGC CCAGAGCTGC GTGGTCACCC GCATTGCCAC CCGCAATATC
TCCGCCGCGG TGACGGTAAT GGTGCCCAAC TCCCTGGGGC CGGGTGAGCT GTTGATGCAA
TACGGCACCC AGGCGCAGAA GGACTACTGG CTGCCGCGCC TGGCCGACGG CCGCGAGATC
CCCTGTTTCG CCCTCACCGG CCCGGATGTG GGCTCCGATG CGGCGGCCAT GCCCGACTAC
GGGGTGGTCT GTCGGGGCGA GCATGAGGGC CGGGAGGTGC TGGGCATCCG CCTGAGCTTC
AGCAAGCGCT ATATCACCCT GGCGCCGGTG GCCACGGTGC TGGGTCTGGC CTTCAAGCTG
CACGACCCGG ACGGGCTGCT GGGCGGTGAG CGGGACTGCG GTATCACCTG TGCCCTGGTG
CCCACCGACC ACCCGGGGGT GCAGGTGGGG GAGCGCCACT TCCCCATGGG GATGGCCTTC
ATGAACGGCC CGGTGCAGGG CGAGGATGTC TTCATCCCGC TCGACTGGAT CATCGGCGGG
CCGGAGATGG CCGGCCGCGG CTGGCGCATG CTGATGGAGT GCCTGTCGGT GGGCCGAGCC
ATCTCCCTGC CCGCATTGGG CACCGCCGCC GGTCACATGA GCGCGCGCAT GACCGGCGCC
TACGCCCGCA TCCGCCGGCA GTTCAAGCTG CCCATCGGCA AGTTCGAAGG GGTGCAGGCC
GCCATGGCGC GGATTGGCGG CTATGCCTAC CGGCTGGAAG CGGCCCGGCG GCTCACGGCC
AGCGCGGGCG ATCTGGGGGT GAAGCCCTCC GTGGTCTCGG CCATCGCCAA GTACCACATG
ACCGAGATGA TGCGCACCTC CCTGAACGAC GCCATGGACG TGCACGGGGG GCGCGGCATC
ATCTTCGGGC CGCGCAACTA CCTGGGCTAC GGCTACCAGG CCATCCCAGT GGGCATTACG
GTGGAGGGGG CCAACATCCT CACCCGGAAC CTGATGATCT TCGGTCAGGG GGCCATCCGC
TGCCACCCCT ACGTCTTTCC GGAGATGGAG GCGGCGCGCA AGGACGACCT GGCCGGTTTC
GACCGGTTGC TGTTCAGCCA TATCGGGTAT TCGCTGAACC GCGGTGTGCG CGCCTTCGTC
CTGGGGCTGA CCGGTGCCCG CCTCGGCGAC AGTCCGGTCA AGGGGGCCAC CGCCCCCTAC
TATCGGGAGC TCTCGCGCAT GAGTGCGGCC CTTGCCTTTG TCTCCGATGT GGCCATGGGG
GTGCTGGGGG GCGACCTGAA GCGCCGGGAA CGGCTCTCAG CCCGCCTGGG GGATGTGCTC
AGCCACCTTT ACCTGGCCTC GGCGGTGCTC AAGTTCCACG AGGACGCCGG GAGCCCGGAG
GCCGAGCGCC CCTTCCTGCG CTGGGCCCTC GACGACTCGC TCAACGCCAT CTACGAGGCC
TTCGACGGCT TCCTTCGTAA CTTTCCGAAC CGGTTGCTGG CCGGCGTCCT GCGCCGGGTG
ATCTTCCCCC TCGGGCGGCC TTACCACCCG GCCGCCGACC GCGACGGCCA GCGGGTGGCC
GAGGCCCTGA TGGAGCCCGG TGGCGTCCGT GAGCGAGTGA CCGCGATCGG CTACTGGGCG
GAGGATGACC GGGACGACCC CATGGGCCGG ATGGAGGTGG CGCTGCGGAC CCTGGTGGCG
GTGGAGCCCC TCTATAACCG CTTCCAGAAG TGGGTGGCCA AGGGGGAGGC GCAGGGCTTC
AGTTTCGCCG AGCGCATCGC CGACGCCCGT GGCAAGGGGC TCATCACCGC GGCCGAGGCC
GAGCAACTGC AGGCCTGGGA GCACCTGCGC TACGACTGCA TCATCACCGA TGCCTTCCCG
CCGGAGGCGA TCAGCCCCGC CGCCCCGGCG GGGCGATCCG GTGCCGCCCA CTGGCGGCGC
CAGGCCACCG GGTAA
|
|---|
| Protein sequence | MTLIFAIAVA LAGFLALAYA GARLPVWTAA VALYLLGLWV VGAASGAAVA LAALVLAPVA
LLFNLPALRR RVITRPLFQA FKRVLPPMTT TEREALEAGD TWWEGELFQG RPDWQRLRET
PVTRLSDEEQ AFLDNQVATL CRMLDNDRIE REAHDLPAEV WDFIRRERFF SLIIPRQYGG
RAFSSYAQSC VVTRIATRNI SAAVTVMVPN SLGPGELLMQ YGTQAQKDYW LPRLADGREI
PCFALTGPDV GSDAAAMPDY GVVCRGEHEG REVLGIRLSF SKRYITLAPV ATVLGLAFKL
HDPDGLLGGE RDCGITCALV PTDHPGVQVG ERHFPMGMAF MNGPVQGEDV FIPLDWIIGG
PEMAGRGWRM LMECLSVGRA ISLPALGTAA GHMSARMTGA YARIRRQFKL PIGKFEGVQA
AMARIGGYAY RLEAARRLTA SAGDLGVKPS VVSAIAKYHM TEMMRTSLND AMDVHGGRGI
IFGPRNYLGY GYQAIPVGIT VEGANILTRN LMIFGQGAIR CHPYVFPEME AARKDDLAGF
DRLLFSHIGY SLNRGVRAFV LGLTGARLGD SPVKGATAPY YRELSRMSAA LAFVSDVAMG
VLGGDLKRRE RLSARLGDVL SHLYLASAVL KFHEDAGSPE AERPFLRWAL DDSLNAIYEA
FDGFLRNFPN RLLAGVLRRV IFPLGRPYHP AADRDGQRVA EALMEPGGVR ERVTAIGYWA
EDDRDDPMGR MEVALRTLVA VEPLYNRFQK WVAKGEAQGF SFAERIADAR GKGLITAAEA
EQLQAWEHLR YDCIITDAFP PEAISPAAPA GRSGAAHWRR QATG
|
|---|
| |