| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2079 |
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| Symbol | |
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| ID | 4269398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 2356460 |
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| End bp | 2358196 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638126835 |
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| Product | type IV-A pilus assembly ATPase PilB |
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| Protein accession | YP_742911 |
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| Protein GI | 114321228 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.292786 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCACTG CGAATCCCAG CGTCAGGCTG AGCGGTCTGG CGGGACGCCT GGTCCGCGAG
GGCCTGCTTG ATGAAGCGAC GGCCCGAAAG CACACCGAGC AGGCCGTGAA ACAGCGGCGC
CCACTGATCA GCCATCTGGT CGAGGCCAAG GTGCTGCCGG GCCATGAGGT CATCCAGCAG
GCTGCCATCG AGTTCGGCAT CCCGGCACTG GACCTGGCTG CCGTCGAGCC CGACATCAAT
GCCGTCAAGC TGGTTTCGGA GAAGCTGATC CGGACGCACC AGGCGCTGCC CCTGTTCCGC
CGTGGCAAGC GGTTGTTCCT GGGCGTGGTC GACCCCACCA ACCTCGATGC CCTGGACGAG
ATCAAGTTCC ACACGGGGCT GACCACCGAG GCCATCCTGG TGGAGCCGGA CAAGCTCACC
CAGGTGATGG AGCGGGCGCT GGATGCGGCG GCCGGGGGCG ATGCCGCGCT CAAGGAACTG
GACCTGGACG AGGACCTGGA GCACCTCTCG GTTGGCGGCG ATGAGCCCCG GGAAGAGCGG
GAGGTCGGCA TCGCCGGCGA GGGCGAGAAG GACGACGCCC CGGTGGTACG ATTCGTCAAC
AAGCTCCTGC TCGACGCCAT CCGCAAGGGC GCCTCGGACA TCCACTTCGA ACCCTTCGAA
AAGGAGTACC GGGTCCGTTT CCGCCAGGAC GGCATCCTCT ACGAGGTCTC CAAACCGCCG
GTGAACCTGG GTGGACGCCT GGCCGCGCGC CTGAAGGTGA TGTCGCGCAT GGACATCGCG
GAAAAGCGCG TACCCCAGGA TGGGCGTATC AAGATGAACA TCTCCCGCAA CCGGGCCATC
GACTTCCGGG TCAGTACCTG CCCCACGCTT TTCGGCGAAA AGGTGGTGCT GCGTATCCTC
GACCCCAGCA GTGCCCAGAT GGGGATCGAC TCCCTGGGCT ACGAGCCGGA GCAGAAACAG
CGCTACCTGG AGGCACTGAG CAAGCCCTAC GGGATGATCC TGGTCACCGG CCCCACCGGC
TCGGGCAAGA CGGTGTCGCT GTACACCGGC CTCCACATCC TCAACACCCC GGACCGGAAC
ATCTCCACCG CCGAGGACCC CTCCGAGATC AACATGCCCG GGGTCAACCA GGTCAACATC
AACCCCAAGG CCGGGCTCAC CTTTGCCAAT ACCCTGCGCG CCTTCCTGCG CCAGGATCCG
GACGTCATCA TGGTGGGTGA GATCCGTGAT CTGGAAACTG CCGAGATCGC CATCAAGGCG
GCCCAGACCG GGCACCTGGT GCTCTCCACC CTGCACACCA ATGACGCCCC GCAAACCCTG
ACCCGCCTGG CCAACATGGG TGTGCCCGCC TACAACATCG CCTCCTCGGT GACCCTGATC
ATCGCCCAAC GGCTAGCCCG CCGGCTCTGC AAGCACTGCA AGGTGCCGGA GGAGGTCCCC
CGCGAGACCC TGCTGGAGGA GGGGTTCACC GAAGCGGATC TGGAGGCCGG CGTCACGGTC
TACGCACCCC AGGGCTGCGA GCACTGCACC GAGGGCTACA AGGGCCGGGT GGGTATCTAC
CAGGTGATGC CCGTCTCCGA CGCCATGGGC CGCCTGATCA TGGAGGGCGG CAACGCCATG
CAGTTGGCCG ACCAGGCGGC CAGAGAGGGG ATTGATGACC TGCGCCGCTC CGGTCTGCGC
AAGGTCATTC AGGGGATGAC CAGCCTGCAG GAAGTCAACC GGGTCACCAA GGACTGA
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| Protein sequence | MVTANPSVRL SGLAGRLVRE GLLDEATARK HTEQAVKQRR PLISHLVEAK VLPGHEVIQQ
AAIEFGIPAL DLAAVEPDIN AVKLVSEKLI RTHQALPLFR RGKRLFLGVV DPTNLDALDE
IKFHTGLTTE AILVEPDKLT QVMERALDAA AGGDAALKEL DLDEDLEHLS VGGDEPREER
EVGIAGEGEK DDAPVVRFVN KLLLDAIRKG ASDIHFEPFE KEYRVRFRQD GILYEVSKPP
VNLGGRLAAR LKVMSRMDIA EKRVPQDGRI KMNISRNRAI DFRVSTCPTL FGEKVVLRIL
DPSSAQMGID SLGYEPEQKQ RYLEALSKPY GMILVTGPTG SGKTVSLYTG LHILNTPDRN
ISTAEDPSEI NMPGVNQVNI NPKAGLTFAN TLRAFLRQDP DVIMVGEIRD LETAEIAIKA
AQTGHLVLST LHTNDAPQTL TRLANMGVPA YNIASSVTLI IAQRLARRLC KHCKVPEEVP
RETLLEEGFT EADLEAGVTV YAPQGCEHCT EGYKGRVGIY QVMPVSDAMG RLIMEGGNAM
QLADQAAREG IDDLRRSGLR KVIQGMTSLQ EVNRVTKD
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