| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2073 |
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| Symbol | |
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| ID | 4270459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 2350167 |
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| End bp | 2352287 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638126829 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_742905 |
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| Protein GI | 114321222 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.748226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.29835 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCC CGCGTAACGG TGAGGACCAG GCCCGGGAGA TGGCCCGGGC CGTGGAGAGC
GGTGCCCGCC AGCCACGCGG CCGGCTGGCC GTGGCGGCCA TCGCGCTGCT GTGCCTGGCC
TGGTCCGCTT TCCAGGTGGC CATCGCCTGG GACCCCATCG ACGCCCACAT CGCCCGGGTC
TGGCACCTGG CCTTCGCCAT CACCCTGGCC TACCTGTTGT TCCCCGCCCG GCACCGCCCG
GCGCCGCGCT GGCTCCGCCC CCTGCAGCGC TTTGGCCTGT TCCGGGACAA CCGCCAGCGC
ATCCCGTGGG TCGATATCCT GCTCGCCCTG GTGGCGGCCG CCGCCACCCT GTGGATCTGG
TGGGACTACG AGGAGATCCT CTGGCGGGCC GGGCTGCCCG AGCCCCAGGA CATCGTCCTG
GGCATCGTGC TGGTGGTGCT GTTGCTGGAG GCAGCCCGGC GAACCTTGGG CTGGGCGCTG
CCCATTCTCG CTGCCCTGTT CCTGATCTAC TGCTTCGCCG GCCCCTGGAT GCCCGGGCTG
CTCCGCCACC GCGGCGTGTC GCTGGAGATC CTGGTCAACG ACATGTACCT GAGCGACTCC
GGGATCTTCG GGGTGCCACT GGGCGTGTCG GTGGGGTTCG TCTTCCTGTT CGTGCTGCTG
GGCGCGCTGC TGGAGCGGGC GGGGGCCGGC AAGTACTTTA TCGACGTGGC CTACTCCGCC
CTGGGCAGCC TGCGCGGCGG CCCGGCCAAG GCGGCGGTGT TCGCCTCCGG GCTCACCGGC
TCGGTGTCCG GCTCCTCCAT TGCCAACACC GTCACCACCG GTACTTTTAC CATCCCGCTG
ATGAAACGGG TGGGTCTGCC GCCGCACAAG GCGGCGGCGG TGGAGGTGGC CGCCTCCACC
AACGGCCAGT TGATGCCGCC GGTGATGGGC GCGGCCGCCT TCATCATGGC GGAGATCGTC
GGCCTGCCCT ATCTCGATGT ACTGCGGGCG GCGATCATCC CGGCGCTGGT GGCCTACATC
GCCCTCTTCT ACGTAGTGCA TGTGGAGGCC TGCAAAGAAA ACGTGGCCGT GGTGCCGCGC
AGCGAACTGC CCCCCTTCTG GTCCACGCTA CTGCGCGGCC TGCACTACCT GGTGCCGCTA
CTGATGCTCA TCTGGTTCCT AGTGATCATG CGCCGCTCGC CGGTGGCCTC GGCACTGCTG
GCCATCCAGG CCACCGTGGT GATCATGCTG GTGCAGCGGC CCATCCTGGC CTACCTGACC
CATCGGCGGA TGGGCGCCGG GGCGCCCCTC TACCGGGTGT TGGGGCAGGC CCTGCTGGGC
GGTGTGGGCG ATGTGCTGCG GGGGATGATC GGCGGCGCCC GGAATATGGT GGCCGTGGGG
GTGGCCACCG CCACCGCCGG GATCATTGTC GGGGTGGTCA GCACCACCGG GCTGGTGGGC
CGCTTCGTCA ACGTCATCGA GGTGCTCTCC ATGGGGAGCC TCTACCTGAT GCTGGGGCTC
ACCGCCCTCA CCTGCATCAT CCTCGGCATG GGGCTGCCCA CCACCGCCAA CTACATTGTC
ATGGCCACGC TGACCGCCCC GGTGATCGTC CAGTTGGGCG GTGACATGGG GCTGCTGATC
CCGGTGATCG CCGCCCACCT GTTTGTGTTC TATTTCGGCA TCCTGGCCGA CGACACCCCA
CCGGTGGGGT TGGCGGCCTA TGCCGGCGCG GCGATCGCCC AGAGCCCGCC CCTGAAGACC
GGGGTCCAGA GTTTCAGTTA CGACCTGCGC ACCGCGATCC TGCCCTTCGT CTTCGTTTTC
AATACCGAAC TGCTGATGAT CAGCGGTTTG GACGAGGCGG GGCGGATCAT CTGGCAGACC
GACCCGGTGG TGATCGGCTG GACGTTCCTC ACCGCCCTGC TGGGGCTGTT CGCGCTGGTC
TCCGCCATCG CCGGCTACGC CGGCAGCCGC TGCCACAGGC TGGAGCGGCT GCTGTTGCTG
GCCCTGGCGC TGCTGCTGCT GCGCCCGGAC TGGCTGGCCG AGCCCACCGC GGCACCGGCC
GCACTGGTCC AGATCGCCTG CCTGGCGGCG TATGGCATGC TGTATCTCTG GCAACGCCGA
CGCGCACCCC GGCCCGCCTG A
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| Protein sequence | MSTPRNGEDQ AREMARAVES GARQPRGRLA VAAIALLCLA WSAFQVAIAW DPIDAHIARV
WHLAFAITLA YLLFPARHRP APRWLRPLQR FGLFRDNRQR IPWVDILLAL VAAAATLWIW
WDYEEILWRA GLPEPQDIVL GIVLVVLLLE AARRTLGWAL PILAALFLIY CFAGPWMPGL
LRHRGVSLEI LVNDMYLSDS GIFGVPLGVS VGFVFLFVLL GALLERAGAG KYFIDVAYSA
LGSLRGGPAK AAVFASGLTG SVSGSSIANT VTTGTFTIPL MKRVGLPPHK AAAVEVAAST
NGQLMPPVMG AAAFIMAEIV GLPYLDVLRA AIIPALVAYI ALFYVVHVEA CKENVAVVPR
SELPPFWSTL LRGLHYLVPL LMLIWFLVIM RRSPVASALL AIQATVVIML VQRPILAYLT
HRRMGAGAPL YRVLGQALLG GVGDVLRGMI GGARNMVAVG VATATAGIIV GVVSTTGLVG
RFVNVIEVLS MGSLYLMLGL TALTCIILGM GLPTTANYIV MATLTAPVIV QLGGDMGLLI
PVIAAHLFVF YFGILADDTP PVGLAAYAGA AIAQSPPLKT GVQSFSYDLR TAILPFVFVF
NTELLMISGL DEAGRIIWQT DPVVIGWTFL TALLGLFALV SAIAGYAGSR CHRLERLLLL
ALALLLLRPD WLAEPTAAPA ALVQIACLAA YGMLYLWQRR RAPRPA
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