| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2066 |
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| Symbol | |
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| ID | 4270452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 2342334 |
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| End bp | 2344088 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638126822 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_742898 |
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| Protein GI | 114321215 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.684851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.148917 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCAAC GACCCAACCC CGAATCGTCG CCGGACCCCG AGCCTGGGGC GCCGATGGCC
GACCAACCGG CCTTCCGACT GGCCCCGGTG GCGCAATTGA TCCTCGATGA AGGGGGCACC
ATCCATGCCC TGAACGAGCA GGCCCGGGCC TTTCTCGAGG CCTCGGCGGA GCCCCTCCGG
CAGCGGCCAT TCTGGCAATT GATGGTGGAC GGGGACGCCG TACGTCTGCA GCGTGCGCTG
GCGAACCAGC GTCCGGAGGC GGGCGTGCGC CGGTACTGCG GCCTGCAGCT TGCCGCGGGC
TGCCGTGTGG ATCTGTCGGT GCGCCATGTG GGCGCCGGGC GACTGCTCTG TGCCCTGGAG
CATGTGCCGC CCGGTACCGG GGATGACAAG GAGGTGGCGC GGCTGGCCCG TGAAGTCCGG
GAGCAGCGCA CCGCGCTGGA GCGCCTGGCC CACTACGATG CCCTGACAGG GCTCCCCAAC
CGATGGTTTT TTGAACGGTT TCTCGACAAC CAGTTGCAGC GGGCGGGGGA TAACGACGGG
CATCAGATCG CGGTGCTGGT GCTGGATCTG GATCACTTCA AGGCCGTTAA CGACCGGTTC
GGCCACAGTG AGGGGGACCA GGTGCTCAAA GAGGCCACCC GGCGTATCCT CGCCTGCGTG
CGCGATGTGG ACATGGTCTC TCGCATCGGT GGCGACGAGT TTGTGGTGGT CCTGGGCCGG
TTGCGCGGTC GTGGCGGTGC CAGCCGGGTG GCGCGGGCGC TGATCCGCTC GCTGAGCCGG
CCCTTTACCG TGGGCGCGCG CAGCCACCGG CTCACCGCCT CGGTGGGTGT GGCCTTCTAC
CCCAAGGACG GGGAAACGGT GGAGGACCTG ATCCGGCGGG CCGATCTGGC GATGTTTCAA
GCCAAGGACC GCGGCCGCAA TGGCTGGGCG GCCTTTGACT ACGAGCATGA GCACCACTTG
TTGGAGGAGG ATCACTGGAA GGGGCTACTC TGGCGCACCA TCGACGCCCC TGGTCGTTAT
CTCACCATGA ACTACCAGCC GATCCTGCGC CTGCGCGACG GCCGGCCCCG GCCCTGGGCG
CTGGAGGCCC TCCTCCGGGT CCAGGGCCAC GACCAGCAGA CCCTAGACAC CGGCACCCTG
GTCCGGGCGG CCGAGGAACA CCACATGATA CTGCCGCTGG GGGAGGCCAT CTTCGCGCGG
ATCTGCGCCG AGGTGGCGGC GATGCGCCAG GAGGGCATGA GGCTGCCGGT GACGGTCAAC
CTTTCCGCGG ATCAGTTCCT CGATCCGTGC CTGGTGGGGC GGATGGATAG GGTCTGCCAG
GCCCACGGCG TGCCCATGAA TGCCCTCTGC TTCGAGATCA CCGAGACGGC GCTGGTACGC
AATCTGTCGG GGGCCCGGGA GATGGTCCAG GCGCTGCAGG CGGCGGGGGC CCTGATCCTG
CTCGATGACT TCGGCAGTGG GTACGCCTCG CTCTCCCAGT TGCACAGCCT GCCGGTGGAT
GTGCTCAAGA TCGATGCCGG CTTCATCGCG GAGGTCGGGC GCAGCCCCCA GGCCGAGGCC
CTGATCCGCG CCATCCTGGC GATGGCGCGC GCCCTGGGTA TCGACGTCGT GGCCGAAGGG
GTGGAGACCA ACGCCCAGCG GGTCTGGTTG GAGCGCGAGG GGGTGCAGGG CCTGCAGGGC
TACTATTTCT CCCGGCCGCT GCCCCGTGAA GCGGTTCAGG ACTGGGTGCG CATCCAAGGG
CTCGCGGATG ACTGA
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| Protein sequence | MEQRPNPESS PDPEPGAPMA DQPAFRLAPV AQLILDEGGT IHALNEQARA FLEASAEPLR
QRPFWQLMVD GDAVRLQRAL ANQRPEAGVR RYCGLQLAAG CRVDLSVRHV GAGRLLCALE
HVPPGTGDDK EVARLAREVR EQRTALERLA HYDALTGLPN RWFFERFLDN QLQRAGDNDG
HQIAVLVLDL DHFKAVNDRF GHSEGDQVLK EATRRILACV RDVDMVSRIG GDEFVVVLGR
LRGRGGASRV ARALIRSLSR PFTVGARSHR LTASVGVAFY PKDGETVEDL IRRADLAMFQ
AKDRGRNGWA AFDYEHEHHL LEEDHWKGLL WRTIDAPGRY LTMNYQPILR LRDGRPRPWA
LEALLRVQGH DQQTLDTGTL VRAAEEHHMI LPLGEAIFAR ICAEVAAMRQ EGMRLPVTVN
LSADQFLDPC LVGRMDRVCQ AHGVPMNALC FEITETALVR NLSGAREMVQ ALQAAGALIL
LDDFGSGYAS LSQLHSLPVD VLKIDAGFIA EVGRSPQAEA LIRAILAMAR ALGIDVVAEG
VETNAQRVWL EREGVQGLQG YYFSRPLPRE AVQDWVRIQG LADD
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