| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2044 |
|---|
| Symbol | |
|---|
| ID | 4270178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 2315215 |
|---|
| End bp | 2316216 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638126800 |
|---|
| Product | cytochrome d ubiquinol oxidase, subunit II |
|---|
| Protein accession | YP_742876 |
|---|
| Protein GI | 114321193 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
|---|
| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTGA TTGATCTGAC TCTGGTCTGG ATTGCCATTA TCGGGCTGGG CGTGTTCATG
TACGTCCTGC TCGACGGCTT CGACCTGGGC GTGGGGATTC TCTATCCCTT CGCCCCCGGC
GAGGAGGAGC GTGACCTGAT GATGGACTCG GTGGCCCCGG TGTGGGACGG CAACGAGACC
TGGCTGGTGC TGGGTGGTGC CGGCCTGCTG GGCGCCTTCC CGCTGGTCTA CTCGGTCTTT
CTGCCGGCGC TCTACATCGG TGTCTTCCTG CTTCTGGCGG GCTTGATCTT CCGCGGGGTG
GCGTTCGAGT TCCGGGCCAA GGCGAACCGT TCCCGGCCCT TCTGGAACTG GGCCTTCACC
CTGGGTTCCG GGGTGGCCTC CTTCGCCCAG GGCGCCGTGG TCGGGGCCTA CATCCAGGGT
TTCGAGACCG AAGGCTTCAC CTATGTGGGC GGTCCGCTGG ACTGGCTGAC GCCGTTCGTC
GTGATGACCG GTCTCGGCGT GGTGGCCGGC TACGCGCTGT TGGGCGCCAC CTGGCTGATC
ATGAAGACCG AGGGGGAGCT GCAGGACTGG GCACGCCGGG TCGCCAGCCG TACGCTCCTG
GCCGTGTTGG CCTTCTTCGT CATCGTCAGC CTGTGGACCC CGTTGGCCCA TGCCGAGGTC
ATGAGCCGGT GGCTGGATAA CCTGAACTGG TTGTGGCTCT TCCCGGTGGT GACGCTGCTG
GTCAGCTACT GGTTGTGGCG GGCCTTGCAG CAGCGCCAGG AGGGGACGCC CTTCGTTGCC
GCCATGGCCC TGTTTGCCAC CTTCTACGTG GGTCTGCTGA TCAGCATGTG GCCCTACGCG
GTGCCGCCGC ACCACACCTT CTGGGATGCC TCGTCCAGCC CGGATGCCCA GCTCTTCCTG
CTGGTGGGCA TGCTCCTCTT GCTGCCCGTG GTCATGGGGT ATACCGCCTG GACCTACTGG
GTCTTCCGCG GCAAGGTGCG CCCTGGCGAG GGTTATCACT GA
|
|---|
| Protein sequence | MELIDLTLVW IAIIGLGVFM YVLLDGFDLG VGILYPFAPG EEERDLMMDS VAPVWDGNET
WLVLGGAGLL GAFPLVYSVF LPALYIGVFL LLAGLIFRGV AFEFRAKANR SRPFWNWAFT
LGSGVASFAQ GAVVGAYIQG FETEGFTYVG GPLDWLTPFV VMTGLGVVAG YALLGATWLI
MKTEGELQDW ARRVASRTLL AVLAFFVIVS LWTPLAHAEV MSRWLDNLNW LWLFPVVTLL
VSYWLWRALQ QRQEGTPFVA AMALFATFYV GLLISMWPYA VPPHHTFWDA SSSPDAQLFL
LVGMLLLLPV VMGYTAWTYW VFRGKVRPGE GYH
|
|---|
| |