| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2043 |
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| Symbol | |
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| ID | 4270177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 2313740 |
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| End bp | 2315059 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638126799 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_742875 |
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| Protein GI | 114321192 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.339367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCACGG CAGGGGGCAC CGGGCGCTGG CAGCCCGATG CGCGGGCGAT GCTGGAGGCC
TTTGACGAGG CGGCCATCCT GATCGGCCTC GACTACGTGA TCGTCGCGGC CAACGACGCC
TACCAACGCC TCTACGGCGA TGCCCCCATC GACCGGGGGC AGCGCTGTTT CGAGGTCTCC
CACCACTACA ACGTCCCCTG TGACCAGGCC GGTGAGGCCT GTCCGCTGCG CGAGTCCTTG
CGCTCCGGGC GGCGGCACCG GGTGCTGCAC GTCCATCATG GCCCTGAGGG TCAGGAGCAC
GTGGATGTGG AGACCTGGCC GGTCCCCGGG CCGGACGGGC AGGTGCAGTT CTTTATTGAG
GTGTTGCGCC GGCTGCCGGT GGCCAGTGCC CAGGCCAACG GCGGTGAGCT GACCGGCCGC
TGCCGCGCCT TCAACCGGAT GCTTGGGCTG ATCAGCCGGG CCGCCCCCAG CGATGCCTCT
GTGCTGCTGC AGGGCGAGAC CGGGACCGGC AAGGAGTTGG TGGCCCGTGC CGTGCACCAG
GCCAGCCTGC GCCAGGAGGC GCCTTTCGTG CCGGTGGACT GCTCGGGGCT CACCGAGACC
CTGTTCGAGA GCGAGCTGTT CGGTCATGAG AAGGGCTCGT TCACCGGTGC GGTCTCCTCG
CGGATCGGCC TGGTGGAGGC GGCCTCGGGC GGGACGCTCT TCCTCGACGA GGTGGGGGAT
ATCCCCCTGG CCCTCCAGGT CAAGCTGCTG CGCCTGCTGG AGACTCGCAG CTTCCGCCGG
GTGGGCAGTG TCGAGCCGCG GCGGGCCGAT TTCCGCCTCG TGGCGGCCAC CCACCGCGAC
TTGCGGCGGA TGGTGGAGCA GGGCCAGTTC CGCGAAGACC TCTACTACCG GATCTCCACC
TTTCCCATCG ATGTGCCGCC ACTGCGCGCG CGGCTGGATG ACCTGCCGCT GCTCTGTCAG
GCCATCCTGC GCCGGCTGCA GTACGGCCAG GGGCGGTATC TCTCCGACGA GGCATTGGCG
GAGCTCCAGG GCTATGACTT TCCGGGCAAT GTCCGCGAGC TGCGCAATGT CCTGGAGCGT
GCGAGCCTGC TGGCGGACGG CCCGGAGATC CTGCCAGAGC ACCTGTCACC AGAGGTCAGG
GGGCGGCAGG GGCTTGCGGT GCTGCCGGAG GACGAGCTGC TGAGCCTGGA GGAGGCGGAG
GCGCACTATC TGGGCCGGGC ACTGGCCCTG CATCAGGGCG ACCGGGCCAG CCTGGCCCGC
CTGCTCGGGG TGAGTGAGCG GACCCTTTAC CGCAAGCTGC GGCGCCACGG ACTGGGTTGA
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| Protein sequence | MGTAGGTGRW QPDARAMLEA FDEAAILIGL DYVIVAANDA YQRLYGDAPI DRGQRCFEVS
HHYNVPCDQA GEACPLRESL RSGRRHRVLH VHHGPEGQEH VDVETWPVPG PDGQVQFFIE
VLRRLPVASA QANGGELTGR CRAFNRMLGL ISRAAPSDAS VLLQGETGTG KELVARAVHQ
ASLRQEAPFV PVDCSGLTET LFESELFGHE KGSFTGAVSS RIGLVEAASG GTLFLDEVGD
IPLALQVKLL RLLETRSFRR VGSVEPRRAD FRLVAATHRD LRRMVEQGQF REDLYYRIST
FPIDVPPLRA RLDDLPLLCQ AILRRLQYGQ GRYLSDEALA ELQGYDFPGN VRELRNVLER
ASLLADGPEI LPEHLSPEVR GRQGLAVLPE DELLSLEEAE AHYLGRALAL HQGDRASLAR
LLGVSERTLY RKLRRHGLG
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