Gene Mlg_2027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_2027 
Symbol 
ID4268143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp2297727 
End bp2298449 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content54% 
IMG OID638126783 
ProductNi/Fe-hydrogenase, b-type cytochrome subunit 
Protein accessionYP_742859 
Protein GI114321176 
COG category[C] Energy production and conversion 
COG ID[COG1969] Ni,Fe-hydrogenase I cytochrome b subunit 
TIGRFAM ID[TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACAG CAGAAGAAGA AGTGAAAGGT GGCACATCAA CAAAACAGGA GAAGTGGAAG 
GAGCTTTACG TTTATGAGGC CCCATTGCGT CTGTGGCATT GGGTGAATGC ACTTTGCATC
ATCGTTCTGA TAGCGACGGG GTATCTTATT GCCCATCCCC CGGCGAGCCG GCCGGGGGAA
GCGATTGATA ATTACCTGTT GGGTTACATC CGATTTGCCC ACTTTACCGC CGCGTACATA
TTTGCGATCG GCTTCCTGGG GCGGATTTAT TGGGCCCTGG TGGGTAATGA GCATGCGAGG
CAGCTCTTTA AGTTGCCGCT CTACCGAGGG AGCTGGTGGC GCGAGGTCGG TAGGGAACTG
CGTTGGTACC TGTTCTTGGA GCGGGAACCC AAGAAGTATG TGGGCCACAA TCCTCTGGCA
CAACTCGCGA TGTTTCTGTT CATGACCCTC GGTTCAGTAT TCATGATCTT TACAGGCTTT
GCTCTGTATG CCGAGGGCGC GGGCCAAGGA AGCTGGCAGG ACGCCCTGTT CGGGTGGCTG
ATCCCTCTCT TTGGGAATAC TCAGTTGCTG CACTCATGGC ACCACCTGGG AATGTACTGG
ATCGTGCTCT TTGTGATCGT CCACATTTAC GTGGCGTTCC GAGAGGACAT TATGTCGCGG
CAGAGCATCA TCAGCACGAT GGTCAGTGGC CACCGTCTGT TCAAAGACAA TCGGCGCGAT
TGA
 
Protein sequence
MATAEEEVKG GTSTKQEKWK ELYVYEAPLR LWHWVNALCI IVLIATGYLI AHPPASRPGE 
AIDNYLLGYI RFAHFTAAYI FAIGFLGRIY WALVGNEHAR QLFKLPLYRG SWWREVGREL
RWYLFLEREP KKYVGHNPLA QLAMFLFMTL GSVFMIFTGF ALYAEGAGQG SWQDALFGWL
IPLFGNTQLL HSWHHLGMYW IVLFVIVHIY VAFREDIMSR QSIISTMVSG HRLFKDNRRD