Gene Mlg_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_2016 
Symbol 
ID4269616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp2289723 
End bp2289950 
Gene Length228 bp 
Protein Length75 aa 
Translation table11 
GC content64% 
IMG OID638126772 
Producthydrogenase assembly chaperone hypC/hupF 
Protein accessionYP_742848 
Protein GI114321165 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0298] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00074] hydrogenase assembly chaperone HypC/HupF 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTCTGG CAATACCTGT GGAGGTGCTC GAGCTGAAGG AGGACGGGGC TGCCCTGGTC 
GATGCCGGCG GGGTGCGGAA AACGGTGGAT GTCAGTCTGG TTGAGGGCGT GACCGAGGGT
GAGTTCGTCA TTCTGCACGT GGGGTTCGCC ATCAGCCGCC TGGACCGCGC AGAGGCCGAG
CGGACCCTGG CACTGTTCCG GGAGATGGGA CTGGAGGGGG ATGAATGA
 
Protein sequence
MCLAIPVEVL ELKEDGAALV DAGGVRKTVD VSLVEGVTEG EFVILHVGFA ISRLDRAEAE 
RTLALFREMG LEGDE