Gene Mlg_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_2014 
Symbol 
ID4269614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp2287541 
End bp2288593 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content62% 
IMG OID638126770 
Producthydrogenase expression/formation protein HypE 
Protein accessionYP_742846 
Protein GI114321163 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0309] Hydrogenase maturation factor 
TIGRFAM ID[TIGR02124] hydrogenase expression/formation protein HypE 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAGTG GCGCAAAACC CGGCTATGTC CGGCCCCTGA ATTTCCGGCG AGGCAGCGTG 
GAGCTGGCCC ACGGCGGTGG TGGTCGTGCC ATGGCGCAGC TCATTGATGA GCTTTTCATG
GCGGCCTTCG ACAATCCTGC GCTTCGCAAA GGAAATGATC AGGCTGTTGT TGAGCCGCCG
CCCGGCCGTT TGGTGGTGGC CACCGACAGC CATGTCGTCT CGCCGCTCTT CTTTCCCGGG
GGGAATATCG GGAGCCTGGC AGTTCATGGG ACGATCAATG ATGTGGCGAT GTGCGGGGCC
CGTCCGCTGG CCTTGACCGC TGGTTTCATT CTCGAGGAAG GGTATCCGCT TGCCGATCTG
CGCCGGATCG TGGAATCCAT GTCGGAGGCA GCGAGTGCGG CGGGGGTATC GGTGGTGACC
GGCGATACCA AGGTCGTCGA GCGGGGCAAG GGTGACGGGG TGTTTATCAA CACGACGGGC
ATCGGCGTGG TGCCTCCGGG GCTGGAGCTG TCGGGGGATC GAGCCCGTCC TGGTGATCAC
GTACTGGTCA GCGGCCCCAT CGGGGATCAT GGTGTTGCCA TTATGTCGCT GCGGGAAAGC
TTAGGCTTCG AGGCCCCGAT TACCTCCGAT TCGGCCGCGC TGCATGAACT TGTGGCCGCC
ATGCTGGATG AGGTCCCGCA GGTGCGTTGC CTGCGGGATC CCACGCGCGG GGGAGTGGCG
GCGACGCTGA ACGAGTTGAG CCGCCAATCA GGCGTGGGAA TAGTTATCCG GGAGGAGGCC
CTGCCGATCC GCGAGGCGGT CGATGCCGCC TGTGAATTGC TCGGGCTCGA TCCCTTGTAC
GTGGCGAATG AAGGCAAACT CTTGGCCATT TGTCCGCCGG ATGCCAGCGA GCGCCTGCTA
GCTGTGATGC GCGCTCATCC TTTGGGCTCT GATGCCGCCC TGATTGGGGA GGTGATAGAG
GATAGTCATG GCTTCGTACA AATGGAAACA GCCTTCGGTG GAACAAGGAA TGTGGATTGG
ATCGCGGGAG AGCAGCTTCC CCGCATCTGT TAA
 
Protein sequence
MTSGAKPGYV RPLNFRRGSV ELAHGGGGRA MAQLIDELFM AAFDNPALRK GNDQAVVEPP 
PGRLVVATDS HVVSPLFFPG GNIGSLAVHG TINDVAMCGA RPLALTAGFI LEEGYPLADL
RRIVESMSEA ASAAGVSVVT GDTKVVERGK GDGVFINTTG IGVVPPGLEL SGDRARPGDH
VLVSGPIGDH GVAIMSLRES LGFEAPITSD SAALHELVAA MLDEVPQVRC LRDPTRGGVA
ATLNELSRQS GVGIVIREEA LPIREAVDAA CELLGLDPLY VANEGKLLAI CPPDASERLL
AVMRAHPLGS DAALIGEVIE DSHGFVQMET AFGGTRNVDW IAGEQLPRIC