| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1995 |
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| Symbol | |
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| ID | 4270469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 2263965 |
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| End bp | 2265584 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638126751 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_742827 |
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| Protein GI | 114321144 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1388] FOG: LysM repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0964783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.42715 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTTCACA CACGTATGAT CCCGCTATGC CTGGCGCTGG CCCTGGGCGC CAGCGGCTGT
GCCAGCCTGG ACCCGCGCGG CGCCGACGGC GAATCCAAAC GGGGCCATCA CGCCCGTGTC
ATCCTCCCCG GCGAGCCCCT CGCCAATGTC CCCGTGCCGG AAGAAGAGCG CCGCCCCGCG
GAGAGCGCAG CCCCGGCGGC GGCGGAGGAT ATTTGGGCCC GGCTTCGTGA CGGCTTTCAA
CTGCCCGCGG TCACCCATCA GCGCATCGAC CAGGAACGCG CCCGGTTCAC CGGTCGTCAG
AACTACTTCG ACGCGGTGGG TCAGCGAGCC CGACCCTACC TCTACCACAT CCTCGGCGAG
CTGGAGGCGC GCGACCTGCC CACCGAATTG GTACTGGTCG CGATGGTGGA GAGCGCTTTC
CAGCCCTTCG CCTATTCCCA CGGTCGCGCG GCCGGCCTCT GGCAGTTCAT ACCCGCCACC
GGCAAGCACT TCGGCCTGGA GCAGAATTGG TGGTACGACG GCCGGCGCGA TGTCATTGCC
AGCACCGAGG CCGCCCTGAC CTACCTGGAC TACCTGCACG GGTTCTTTGA CGGCGACTGG
CTGCTGGCAC TGGCCGCTTA CAACGCCGGG GAGGGCCGGG TACAGCGGGC GGTCAGGGCC
AACCAGCGGG CCGGGAAGGC CACGGACTTC TGGAGCCTGA ACCTGCCGGC CGAGACCCGC
GCCTACGTCC CCCGGGTGCT GGCACTGCGC GACATCCTTG CCGAACCGGA CCGGTTCGGC
ATCCGGCTGC CGCCCATCGA CAACGAACGA CAACTGGCGG TGGTCGAACT GGAGCACCAG
TTGGACTTGG CCCTGGCGGC GGAGATGGCC GGCGTCGAGC TGGACAAGAT CTATCGCTAT
AACCCCGGTT TCAACCGCTG GGCGACGTTG CCGGAGGGCC GCCACCGCCT GGCCATCCCC
AAGGCGAGCA AAGAGCGCTT CACCGCTGCG CTGGCCGATC TCCACCCCTC CGAGATGGTC
CGCTGGCAAC GCCACGAGGT CCGGCGCGGT GAAACACTCA GCGGCATCGC CAGCCGTTAC
AACACCTCGG TCTCGGTTTT GCGCGACACC AATGACCTGA GCGGTGACCG AATCCGGGTC
GGACAGGCGC TGCTGGTCCC CACCGCGAGC CAGGGCAACG AGGCCTACAC CCTCAGCGCG
GACAACCGGC GCCGCGCCAA CCAGAACCGG CAGCGGGATG GGAGGCACAA GCTGGAGCAC
ACGGTGCGCC CCGGCGATAC CTTCTGGGAG CTCGCCCGGC GCCACGGCGT CAGCGTCCGG
GAACTGGCGG GGTGGAACGA TATGGCGCCC GGCGACCCCC TGCGGCCGGG CAACACGCTG
GTCATCTGGA GTGGCGACGG CGCTGCCGCC AACGCCCGCA ACAGCGGGCC GGGCGAGCGC
CTGCAGCGGG TCACCTATAC GGTGCGCAGC GGCGACTCGG TCTACACCAT CGCTCGGCGC
TTCAACGTCT CCATGCAGGA CGTGAAGCGC TGGAATAACC TCCGCTCGGG CCAGTACCTG
CAACCCGGCC AGACCCTGAC CCTGAACGTC GACGTCACCA ACCAGTCGGC CGGACTCTGA
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| Protein sequence | MVHTRMIPLC LALALGASGC ASLDPRGADG ESKRGHHARV ILPGEPLANV PVPEEERRPA
ESAAPAAAED IWARLRDGFQ LPAVTHQRID QERARFTGRQ NYFDAVGQRA RPYLYHILGE
LEARDLPTEL VLVAMVESAF QPFAYSHGRA AGLWQFIPAT GKHFGLEQNW WYDGRRDVIA
STEAALTYLD YLHGFFDGDW LLALAAYNAG EGRVQRAVRA NQRAGKATDF WSLNLPAETR
AYVPRVLALR DILAEPDRFG IRLPPIDNER QLAVVELEHQ LDLALAAEMA GVELDKIYRY
NPGFNRWATL PEGRHRLAIP KASKERFTAA LADLHPSEMV RWQRHEVRRG ETLSGIASRY
NTSVSVLRDT NDLSGDRIRV GQALLVPTAS QGNEAYTLSA DNRRRANQNR QRDGRHKLEH
TVRPGDTFWE LARRHGVSVR ELAGWNDMAP GDPLRPGNTL VIWSGDGAAA NARNSGPGER
LQRVTYTVRS GDSVYTIARR FNVSMQDVKR WNNLRSGQYL QPGQTLTLNV DVTNQSAGL
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