| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1991 |
|---|
| Symbol | |
|---|
| ID | 4270465 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 2261013 |
|---|
| End bp | 2261744 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638126747 |
|---|
| Product | DNA polymerase III, epsilon subunit |
|---|
| Protein accession | YP_742823 |
|---|
| Protein GI | 114321140 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
|---|
| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.886511 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.0774886 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCAGA TCGTGCTGGA TACTGAGACC ACCGGTCTGG AGTGGAGTCA GGGCGATCGG
GTGATCGAGA TCGGCTGCGT GGAACTGGTG GACCGCCGGC CCACCGGCAA TAACTTCCAC
CAGTACCTGA ACCCCGATCG CGAGGTGCCC CAGGAGGCGG TGGAGGTGCA CGGCATCACC
AACGACTTTC TGGCCGACAA GCCGCGCTTT CACGAGGTGG CGGAGCGCTT TGTCGAGTAC
ATCCGGGGCA GCGAGTTGGT GATCCACAAC GCCGCCTTCG ACGTCGGCTT CCTGGACTAC
GAACTCAGCC GTCTGGGCCG TGGCTGGGGC CGGGTGGAGG ACTTTGCCTC GGTGCTCGAC
ACCCTGCTGT TGGCCCGGCA ACGTCACCCC GGCCAGCGCA ACTCGCTGGA TGCCCTGTGC
AAGCGCTACG ACGTGGACAA TACCCAGCGT GAACTGCACG GCGCGTTGCT CGATGCCCGC
ATCCTGGCCG ACGTTTATCT GGCGATGACC GGCGGCCAGA AGGCCCTGTT CACCCTGGAC
GAGGAGGAGG CTCAGGCCCA CGAAGGGGAG GGCGGTGGGA TACGCCGGCT GCCGTCGGAT
CGGCCCCGCC TTGCAGTGGT GCGGGCCGGG GAGGCCGAGC GCCGGGCCCA TGAGGCGCTG
TTGGACCGTA TCGACAAGGC CTCCGGGGGG GGTTGCCGCT GGCGCCGGCC GGAGGTGGCG
GGTGATGCCT GA
|
|---|
| Protein sequence | MRQIVLDTET TGLEWSQGDR VIEIGCVELV DRRPTGNNFH QYLNPDREVP QEAVEVHGIT
NDFLADKPRF HEVAERFVEY IRGSELVIHN AAFDVGFLDY ELSRLGRGWG RVEDFASVLD
TLLLARQRHP GQRNSLDALC KRYDVDNTQR ELHGALLDAR ILADVYLAMT GGQKALFTLD
EEEAQAHEGE GGGIRRLPSD RPRLAVVRAG EAERRAHEAL LDRIDKASGG GCRWRRPEVA
GDA
|
|---|
| |