| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1989 |
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| Symbol | |
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| ID | 4270463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 2258791 |
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| End bp | 2260212 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638126745 |
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| Product | nodulation efficiency protein NfeD |
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| Protein accession | YP_742821 |
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| Protein GI | 114321138 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1030] Membrane-bound serine protease (ClpP class) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00554582 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0711803 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGAAGA ACGTCCTCGC AGTCCTGTTG CTTTATCTGG CCACCGCACT GCCCCTGGGC
GCGGACGCGG ACCGGCTGGC CCTGGTGCTG GATGTGGAGG GCCCCATCGG CCCGGCCACC
AGCCATTTCA TTGCCGGCGG TCTGAAAACC GCTGAGGAGC GCGACGCCGT GGTGGTCATC
CTGCGTATGG ACACGCCGGG CGGCCTGGAC AGCGCCATGC GCGACATCAT CAAGGACATC
CTCGCCTCTC CGGTTCCGGT GGCCACCTGG GTCGGGCCGG ACGGGGCCCG GGCCGCTAGT
GCCGGCACCT ACATCCTCTA CGCCTCGCAC GTGGCGGCGA TGGCGCCGGC CACCAATTTG
GGTGCGGCCA CGCCGGTGCA GATTGGGGGC GGGGGCGGCT TCCCGCCGGG CGGCCAGCCG
GAACAGGAGG AGGCCGCGGA CGACAACGAC GAGGCGGCCA ACGGCAATGA CGAGGCACCT
GAAGAGCGGC CCCGGCGCGA CCCCGGTTCG GCCACCGAGC GCAAGGTGTT GGAAGACGCG
GTCTCCTACA TTCGCGGGCT GGCGGAATTG CGCGGCCGCA ACGCCGACTG GGCGGAGAAG
GCCGTGCGCG AGGCCGCCAG CGCCAGCTCC AGCGAGGCGT TGGAGCTGGG GGTGATCGAG
CACCGGGTCT CCAATCTGGA GGCGTTGCTG GAGGCCATGG ACGGGCAGAC GGTGCAGACC
AGCGTTGGCG AGGTGACCCT GGATACCGCC GGCGCCACGC TGGAGGTGAT CGAGCCGGAC
TGGCGCACCC AGTTGCTCTC TGTGCTCACC AACCCCAATG TGGCCTACAT GCTGATGCTG
ATCGGCATCT ACGGCATCAT CTTCGAGCTG ATGAACCCGG GCAGCCTGGT CCCCGGTGTG
CTGGGTGCCA TCTGCCTGCT GTTGGCCCTG TTTGCTTTCC AGGCACTGCC CATCAGCTAT
GCCGGTATGG CGCTCATCCT GCTGGGGTTG GGCTTCATGG TGGCGGAGGC CTTCGCGCCC
AGTTTCGGTA TCCTCGGTAT CGGCGGGGTG ATCGCCTTCA TATTGGGCTC GATCATGCTC
TTCGATACCG ACGTGGAGGG CTTTCAGGTC TCCCTCGGGT TGATCGTCGG TTTCGGCATC
GCCAGCCTGG TGATCGTGCT GGGGATCGCG ACCATGGCCC TGCGGGCCTG GCGTCGGCCA
CGCAAGGGCG GCCGTGACAG CATTGTCGGC GCGCGCTGTG AGGCGGTGTC GGATTTCGAG
CACAAGGGTA AGGTGCGCAT CCAGGGGGAG CTCTGGAATG CGTTCACCGA CCAGCCGGTC
AAGGCCGGAC AGGCCCTGGT GGTGGTGGAT ATGGAGGGGC TGAACGTCAA GGTCGCTCCG
GCGGAGACGG CCAGCCACCA CGAGGGGTTG CAACATACCT GA
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| Protein sequence | MLKNVLAVLL LYLATALPLG ADADRLALVL DVEGPIGPAT SHFIAGGLKT AEERDAVVVI
LRMDTPGGLD SAMRDIIKDI LASPVPVATW VGPDGARAAS AGTYILYASH VAAMAPATNL
GAATPVQIGG GGGFPPGGQP EQEEAADDND EAANGNDEAP EERPRRDPGS ATERKVLEDA
VSYIRGLAEL RGRNADWAEK AVREAASASS SEALELGVIE HRVSNLEALL EAMDGQTVQT
SVGEVTLDTA GATLEVIEPD WRTQLLSVLT NPNVAYMLML IGIYGIIFEL MNPGSLVPGV
LGAICLLLAL FAFQALPISY AGMALILLGL GFMVAEAFAP SFGILGIGGV IAFILGSIML
FDTDVEGFQV SLGLIVGFGI ASLVIVLGIA TMALRAWRRP RKGGRDSIVG ARCEAVSDFE
HKGKVRIQGE LWNAFTDQPV KAGQALVVVD MEGLNVKVAP AETASHHEGL QHT
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