Gene Mlg_1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_1980 
SymbolgreA 
ID4268523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp2247996 
End bp2248472 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content65% 
IMG OID638126736 
Producttranscription elongation factor GreA 
Protein accessionYP_742812 
Protein GI114321129 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01462] transcription elongation factor GreA 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.00819368 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCAAGG TTCCGCTGAC TGCGCGCGGC GCGGAAAAGC TGCGGGAGGA ACTGCAGCGC 
CTGAAGACCG TGGAGCGCCC GCGCATCATA CAGGCCATCG CCGAGGCCCG TGAGCACGGC
GACCTGAAAG AGAACGCCGA GTACCACGCC GCCCGCGAGC AGCAAAGCTT CGTGGAGGGC
CGGATTCAGG AGATCGAGGG CAAGCTGTCC AACGCCCAGG TGATCGACCC GGCCGCGGTC
AATGCCCAGG GCAAGGTGAT CTTCGGCGCC ACCGTGGACC TGGTGGACGA GGACTCCGGC
AAGGAGGTTA CCTACCAGAT CGTCGGTGAG GATGAGGCCG ACATCAAGCA GGGCCTGGTC
TCTGTCAACT CACCCATCGC CCGGGCCCTG ATCGGCAAGG AGGAGGGTGA TCTGGTGACG
GTGCAGGCCC CGGGCGGGGA GCGCGAATAC GAGATCGTCG AGGTGCGCTA TTCCTGA
 
Protein sequence
MSKVPLTARG AEKLREELQR LKTVERPRII QAIAEAREHG DLKENAEYHA AREQQSFVEG 
RIQEIEGKLS NAQVIDPAAV NAQGKVIFGA TVDLVDEDSG KEVTYQIVGE DEADIKQGLV
SVNSPIARAL IGKEEGDLVT VQAPGGEREY EIVEVRYS