Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_1980 |
Symbol | greA |
ID | 4268523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | - |
Start bp | 2247996 |
End bp | 2248472 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638126736 |
Product | transcription elongation factor GreA |
Protein accession | YP_742812 |
Protein GI | 114321129 |
COG category | [K] Transcription |
COG ID | [COG0782] Transcription elongation factor |
TIGRFAM ID | [TIGR01462] transcription elongation factor GreA |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.00819368 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCAAGG TTCCGCTGAC TGCGCGCGGC GCGGAAAAGC TGCGGGAGGA ACTGCAGCGC CTGAAGACCG TGGAGCGCCC GCGCATCATA CAGGCCATCG CCGAGGCCCG TGAGCACGGC GACCTGAAAG AGAACGCCGA GTACCACGCC GCCCGCGAGC AGCAAAGCTT CGTGGAGGGC CGGATTCAGG AGATCGAGGG CAAGCTGTCC AACGCCCAGG TGATCGACCC GGCCGCGGTC AATGCCCAGG GCAAGGTGAT CTTCGGCGCC ACCGTGGACC TGGTGGACGA GGACTCCGGC AAGGAGGTTA CCTACCAGAT CGTCGGTGAG GATGAGGCCG ACATCAAGCA GGGCCTGGTC TCTGTCAACT CACCCATCGC CCGGGCCCTG ATCGGCAAGG AGGAGGGTGA TCTGGTGACG GTGCAGGCCC CGGGCGGGGA GCGCGAATAC GAGATCGTCG AGGTGCGCTA TTCCTGA
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Protein sequence | MSKVPLTARG AEKLREELQR LKTVERPRII QAIAEAREHG DLKENAEYHA AREQQSFVEG RIQEIEGKLS NAQVIDPAAV NAQGKVIFGA TVDLVDEDSG KEVTYQIVGE DEADIKQGLV SVNSPIARAL IGKEEGDLVT VQAPGGEREY EIVEVRYS
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