Gene Mlg_1978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_1978 
Symbol 
ID4268521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp2247193 
End bp2247495 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content68% 
IMG OID638126734 
Producthypothetical protein 
Protein accessionYP_742810 
Protein GI114321127 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 
TIGRFAM ID[TIGR00253] putative RNA-binding protein, YhbY family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.00695229 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGGCTCA ACGAGTCCCA GCGTCGCCAC CTGCGTCGCC TGGCCCACGA CCTCAAGCCC 
GTGGTCCGCA CCGGCAATGC CGGCCTCACC GAGGCGGTGA TGGCCGAGAT CGAACTGGCG
CTGGAGTCCC ACGAGCTCAT CAAGGTGAAG CTGGTGGGCC TGGAACGCGC AGACCGGCAG
CCCACCATCG AGCAGATCTG CGTCGAAACC GGGGCCGAGC TGGTGCAGAA GGTGGGTCAG
GTGGCAGTGC TCTATCGCGC CAACCCGCGC CGGAAGCCCG GCCAGCGGGT CAGTCTGCCG
TGA
 
Protein sequence
MRLNESQRRH LRRLAHDLKP VVRTGNAGLT EAVMAEIELA LESHELIKVK LVGLERADRQ 
PTIEQICVET GAELVQKVGQ VAVLYRANPR RKPGQRVSLP