Gene Mlg_1958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_1958 
Symbol 
ID4268160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp2227347 
End bp2228852 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content64% 
IMG OID638126713 
Productproton-translocating NADH-quinone oxidoreductase, chain M 
Protein accessionYP_742790 
Protein GI114321107 
COG category[C] Energy production and conversion 
COG ID[COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) 
TIGRFAM ID[TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0280811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGACG GTTGGTTGCT GAGTCTGCTG ATCTGGCTGC CCATCCTCGG TGGGGTAGCG 
GTGATGGTCC TGGGGGACAG TGCGCCCGAT CGGGTCCGCT GGACGGCTCT GGGTATTGCG
CTGGTGACCT TCCTGGCCAG CCTCCCGCTG TATTTCGGCT TCGAGCCGGG CACCCACGAG
ATGCAGTTCG TGGAGCAGCG GGAGTGGGTA TCGGCGCTGC AGGTGTACTA TCACCTGGGT
GTGGACGGCA TCTCCATGCC GCTGATCATC CTCACCACCT TCTGTACCCT GTTGGTGGTC
ATTGCCGGCT GGGAGGTGAT CAAGTATCGG CCGTCCCAAT ACCTGGCCGC CTTCCTGATT
ATGGAGGGCA TCATGGTGGG CGTGTTCTCC GCCCTTGATG CCATCCTGTT CTACGTCTTC
TTCGAGGCGA TGCTGGTGCC GATGTTCCTG ATCATCGGCA TCTGGGGCGG GGCCAACCGC
ATCTACGCGA CCATCAAATT CTTCCTCTAC ACCTTCCTGG GCTCCGTGCT CATGCTGGTG
GCGGTGATCT ACCTGCGGCT GCAGGCCGGC AGCTTCGGCA TCCTGGACAT GCACGGCCTC
GACCTGGGGC TCACCGCCCA GGTGCTCATC TTCCTGGCCT TCCTGGGCGC GTTCGCGGTG
AAGGTGCCCA TGTGGCCGGT GCACACCTGG TTGCCGGACG CCCACGTGGA GGCGCCCACC
GGGGGGTCCG TGATCCTGGC GGCGATCATG CTGAAGATCG GCGGCTACGG CTTCCTGCGC
TTCTCGCTGC CGATCACCCC GGAGGCCAGC ATGACGCTGG ACTGGCTGAT CATCCTCATG
TCCCTGGTGG CCGTGGCCTA TATCGGCCTG GTGGCCATGG TCCAGAAGGA TATGAAGAAG
CTGATCGCCT ACTCCTCCAT CGCCCACATG GGCTTCGTGA CCCTGGGCTT CTTCCTGATC
TTCCAGATCA TGGCCAACGG GGGCGGTGAG CAGGGGGGCA TGCTGGCGCT GCAGGGTGGC
ATGGTCCAGA TGATCTCCCA CGGCTTCATC TCGGCGGCCA TGTTCCTCTG CGTCGGCGTT
CTGTACGATC GCATGCACTC CCGCCAGATC GCCGACTACG GCGGCGTGAT CAACACCATG
CCCTGGTTTG GCGCCTTTTT CGTCCTGTTC GCCATGGCCA ATGCCGGGCT GCCGGGCACC
TCCGGCTTCG TCGGCGAGTT CATGGTTATC CTGGCGGCCT TCCAGGCGAA CTTCTGGTAC
GCCTTCGTGG CGGGGACCAC CCTGGTGTTG GGGGCCGCCT ACTCGCTGTG GATGGTGAAG
CGGGTGATCT TTGGCGAGGT GGCCAACGAG AATGTGGCCA AGCTCGAGGA CGTGAATCGG
CGCGAGGTGC TGGTGCTGGG GCTGCTGGCG GCCATGGTGC TGCTCCTGGG CCTGTGGCCG
GCCCCGCTGG TTGAGGTGAT GGAGCCGAGC CTGCTTCACC TGCTGAACCA GGTCACGGGT
GCCTGA
 
Protein sequence
MFDGWLLSLL IWLPILGGVA VMVLGDSAPD RVRWTALGIA LVTFLASLPL YFGFEPGTHE 
MQFVEQREWV SALQVYYHLG VDGISMPLII LTTFCTLLVV IAGWEVIKYR PSQYLAAFLI
MEGIMVGVFS ALDAILFYVF FEAMLVPMFL IIGIWGGANR IYATIKFFLY TFLGSVLMLV
AVIYLRLQAG SFGILDMHGL DLGLTAQVLI FLAFLGAFAV KVPMWPVHTW LPDAHVEAPT
GGSVILAAIM LKIGGYGFLR FSLPITPEAS MTLDWLIILM SLVAVAYIGL VAMVQKDMKK
LIAYSSIAHM GFVTLGFFLI FQIMANGGGE QGGMLALQGG MVQMISHGFI SAAMFLCVGV
LYDRMHSRQI ADYGGVINTM PWFGAFFVLF AMANAGLPGT SGFVGEFMVI LAAFQANFWY
AFVAGTTLVL GAAYSLWMVK RVIFGEVANE NVAKLEDVNR REVLVLGLLA AMVLLLGLWP
APLVEVMEPS LLHLLNQVTG A