| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1949 |
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| Symbol | nusA |
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| ID | 4268117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 2217425 |
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| End bp | 2218921 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638126703 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_742781 |
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| Protein GI | 114321098 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.394294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0311483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAG AAATCCTGCT GGTTGTCGAG GCGACCTCCA ACGAAAAGGG CGTGGACCGC
GAGGTCATCT TCGAGGCCAT CGAAGCGGCG TTGGCCTCTG CCACGCGCAA GCGTCACCCG
GAGGACATCG ACGCCCGCGT GGAGGTCAAC CGCAACACCG GCGATTACAG CACCTTCCGG
CGCTGGTGGG TGGTGGAGAG CGACGAAGAT GTCGAATCGC CGGCCCGTCA GATCACGCTG
GAGGAGGCAC GCCAGCGCCA GCCGGACATC GAAGTGGGTG AGTGCCTGGA AGAGCCCATG
GAATCGGTGG AGTTCGGCCG TATCGCCGCC CAGACCGCCA AGCAGGTCAT TGTGCAAAAG
GTGCGGGAGG CCGAGCGTGC CAAGGTGGTG GAGGCCTTCC AGGACCGGAT CGGCGAGCTG
GTGACCGGCA CCGTCAAGCG GCTGGAGCGT GGCAGCGTGA TCATGGACCT GGGCGGCAAC
GCCGAGGCGC TGATCCCGCG TGAGGCCATG ATCCCGCGCG AGGCGGTGCG GCGGGAGGAC
CGGCTGCGCG GCTATCTGAA GGATGTGCGT CCGGAGCCGC GCGGCCCGCA GCTGTTCGTC
AGCCGCACCG CGCCGGAATT CCTGGTCGAG CTCTTCAAGC TGGAGGTGCC GGAGGTGGGC
CAGGAGTTGA TCGAGATCAT GGGCGCCGCT CGCGACCCCG GCGTTCGGGC CAAGATCGCC
GTGCGGGCGC TGGATCCGCG CATTGACCCG GTCGGGGCGT GTGTGGGTAT GCGCGGCTCC
CGCGTGCAGG CGGTCTCCAA CGAACTGGCC GGTGAGCGCA TCGATATTAT CCTGTGGGAT
GACAACCCGG CGCAGTTCGT GATCAACGCG CTGGCCCCCG CCGAGGTGGA GTCCATCGTC
GTGGACGAAG ACCGCCACAG CATGGATATT GCCGTGGCCG AGGAGCAGCT TTCCCAGGCC
ATCGGGCGCG GTGGGCAGAA CGTCCGCCTG GCCAGTGAGC TCACCGGCTG GGAACTCAAC
GTGATGACCG CCGAGGAGGC CGAGGCCAAG AACCAGGAGG AGGCGGCTCA GTACCAGCAG
CTTTTCCAGG AGAAGCTGGA CGTGGACGAG GAGATCGCCG CCATCCTGGT GCAGGAGGGT
TTCTCCAGCC TCGAAGAGGT GGCCTATGTC CCGGCCGCCG AGCTGCTGGA GGTCGAGGAG
TTCGACGAAG ACATCGTTGA CGAGTTGCGG GCGCGGGCCC GTGATGTCCT CGTCAGTGAG
GCGGAGGAGC GCGAGAGTGC CGGCACCGAG CCGGCAGAGG ATCTGCTGAC CATGGAAGGC
ATGGACGAGG ACCTGGCCCG GGCGCTCGCC GCACGGGGCG TGTGCACCAT GGAGGACCTG
GCGGAACAGT CCGTGGATGA ATTGATGGAG ATCGAGGGCA TGGACGAGAC CCGTGCCGGT
CAGCTCATCA TGAAGGCCCG GGAGCCGTGG TTCGCGGACC AGCAGGACGA TGAATAG
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| Protein sequence | MSKEILLVVE ATSNEKGVDR EVIFEAIEAA LASATRKRHP EDIDARVEVN RNTGDYSTFR
RWWVVESDED VESPARQITL EEARQRQPDI EVGECLEEPM ESVEFGRIAA QTAKQVIVQK
VREAERAKVV EAFQDRIGEL VTGTVKRLER GSVIMDLGGN AEALIPREAM IPREAVRRED
RLRGYLKDVR PEPRGPQLFV SRTAPEFLVE LFKLEVPEVG QELIEIMGAA RDPGVRAKIA
VRALDPRIDP VGACVGMRGS RVQAVSNELA GERIDIILWD DNPAQFVINA LAPAEVESIV
VDEDRHSMDI AVAEEQLSQA IGRGGQNVRL ASELTGWELN VMTAEEAEAK NQEEAAQYQQ
LFQEKLDVDE EIAAILVQEG FSSLEEVAYV PAAELLEVEE FDEDIVDELR ARARDVLVSE
AEERESAGTE PAEDLLTMEG MDEDLARALA ARGVCTMEDL AEQSVDELME IEGMDETRAG
QLIMKAREPW FADQQDDE
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