| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1948 |
|---|
| Symbol | infB |
|---|
| ID | 4268116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 2214700 |
|---|
| End bp | 2217351 |
|---|
| Gene Length | 2652 bp |
|---|
| Protein Length | 883 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638126702 |
|---|
| Product | translation initiation factor IF-2 |
|---|
| Protein accession | YP_742780 |
|---|
| Protein GI | 114321097 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.0536071 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAG ACAAGGTAAG AGAGTTCGCG GAAACGGTCG GCATCCCGGT GGAGCGCCTG
GTGTCCCAAC TGGAGGCGGC GGGCATCAGT GGGCGTGGGC CGGAGGACCC CCTTTCCGAT
CTGGACAAGG CCACCCTGCT CGAATACCTG CGCAAGGGGC GTGACGGCGG TGAGCAGGAC
GACGACCAGG CGCCCAGCAA GATCACCCTC CGGCGCAAGA AGGTCAGTAC GCTGAAGATG
CCCGCCAGCG GGGGCGGGGG CAGCGGCGCC CGGGGCCCCC GGCAGACGCG CACGGTCAAC
GTGGAGGTGC GCAAGAAGCG CACCTACGTG AAACGCAGCG TGGTGGAGGC CGAAGAGTCC
AAACACGACG TCGAGCGCCT GGAGCGGGCC CTGATCGAGG ACCGCAAGCG GGCGGAGGAG
CGGGCGCGTC GGGAGGCCGA GGAGGCTGAG GCCCGCCGCC GTGAGCAGGA GGAGGCCGAG
CGCCGACAGG CGGAAGCCGA GGCGCTCCGT CAGGCGGAGG CCGAACGTGA GGCCACGGCC
GAGACGGCCG GCGTCGCCGA CGAGGCGGAC AAGGCCGAAC CCCAGCCCGA TCCGGAAGCG
GCACGACTGG CTGCCGAGAA GGAAGAGGCG CGCAGGCGCG AGGAAGAGAA GGAGCGCCGC
CGGCTGGAGC AGGAGGCCCG GCGCGAACGC GAGGCCGAGG AGCGCGCGGC CCGTAAGACC
GGCGCCACCG CGCCTGCTGC CAAGGGCAAG CAGAAAAAGG GCCGGGAGAG CCTCTCCATG
GGCGCCGGCA AGCCCGGCCG CCGGGGGGGC AAGAAGGGCG GCAGGCGTGC CGCCTCCGGT
GGTGAGGCGG CCAAGCAGCT ACAGCATGGC TTCGCCAAAC CCACCCAGCC GGTGGTGCGT
GAGGTGGAGA TCCCTGAGAG CATCACCGTC GGTGATCTGG CACAGAAGAT GAGCGTCAAG
GCCGCCGTGC TCATCAAGGA GATGATGAAG CAGGGGGTGA TGGCGACCAT CAACCAGGCC
CTGGACCAGG ACACCGCGGT CCTGCTGGTC GAAGAGATGG GCCACAAGCC GGTGATTGTG
CGTGCGGACG CCCTTGAGGA GGAGGTGCTG CAGGATACCT CCCAGGCCCA GGAGGGCGAC
AAGGCCCCGC GGCCGCCGGT GGTCACCGTC ATGGGCCACG TCGACCACGG CAAGACCTCG
CTGTTGGACA ACATCCGCCG GGCCAAGGTG GCGGACGCCG AGGCCGGGGG GATCACCCAG
CACATCGGCG CCTACCACGT GGAGACCGAC CGCGGCATGG TCACCTTCCT GGACACCCCG
GGACACGAGG CCTTCACCGC CATGCGTGCC CGTGGTGCCC AGTTGACCGA CATCGTGGTG
CTGGTGGTGG CGGCCGACGA CGGCGTCATG CCCCAGACCG AAGAGGCGGT GCGCCATGCC
AAGGCGGCCG AGGTGCCGAT GGTGGTGGCG GTCAACAAGA TCGACAAGCC GGATGCGGAC
CCGGACCGGG TCAAGCAGGA GCTCTCGCAG ATGGAGGTCA TCCCCGAGGA GTGGGGCGGT
GATGTCCAGT TCATCCACGT CTCGGCAAAA CAGGGCGAGG GTCTGGATGA TCTGCTGGAG
GCGATCCTGC TGCAGGCCGA GCTGATGGAG CTGGGGGCCG TGGCCGAGGG CAACGCCTCC
GGTATCGTGC TGGAGTCCAG TCTGGACAAG GGGCGCGGCC CGGTGGCCAC GGTGCTGGTG
CAGAGCGGCC TGCTGAAGAA GGGCGACAGC CTGCTCTGCG GCACCGAATA CGGCCGCGTG
CGTGCGCTGA TCGACGAGAC CGGCAAGCGG GTCGACGAGG CCGGGCCCTC GATCCCCGTG
GTGGTGCTTG GGCTCTCCGG TCTGCCCTCC GCCGGCGACG ACATGGTGGT GGTCGACGAC
GAGAAGAAGG CCCGTGAGGT GGCCGAGATG CGCAAGGAGC GTCAGCGCGA CAAGCGTCTG
GCCCAGCAGC AGGCGGCCCG CATGGAGAAC CTCTTCAACC AGATGAAGGA GGATGAGGTC
AACACGGTCA ACCTGGTGGT CAAGGCGGAC GTCCAGGGCA GTGCCGAGGC GCTGCAGCAA
TCGCTGGCCA ACCTCTCCAC CGACGATATC CAGGTCAAGG TGATCTCCTC CGGCGTGGGC
GCCATCAACG AGTCCGATGT CAACCTGGCC CTGGCCTCCA ACGCCATCCT GATCGGCTTC
AACGTGCGTG CCGATGCGGC TGCCCGGCGT CTGGTCCAGG AGAACGACGT CGACCTGCAC
TACTACAGCG TCATCTACGA CGCCATCGAG CAGGTGAAAA ACGCCATCTC CGGGATGTTG
GAACCGGAAC TCGAGGAGCA CATCATCGGC CTGGCAGAGG TCAAGGACGT GTTCCGCTCC
TCCAAGCTTG GCGCGGTGGC CGGCTGTCTG GTCACCGAGG GGGCAGTGCG CCGGAAGAAC
CCCATCCGCG TGCTGCGCGA CAACGTGGTC ATCTACGAGG GCGAGCTGGA GTCCCTGCGC
CGCCACAAGG ACGACGTCAC CGAGGTCAAG TCCGGCACCG AGTGTGGTAT CGGCGTTAAG
AACTACAACG ACGTCCGCAT TGGCGACCAG ATCGAGTGCT ACGAGCGCGT GGAAGTGCGC
CGCGAGCTGT GA
|
|---|
| Protein sequence | MAEDKVREFA ETVGIPVERL VSQLEAAGIS GRGPEDPLSD LDKATLLEYL RKGRDGGEQD
DDQAPSKITL RRKKVSTLKM PASGGGGSGA RGPRQTRTVN VEVRKKRTYV KRSVVEAEES
KHDVERLERA LIEDRKRAEE RARREAEEAE ARRREQEEAE RRQAEAEALR QAEAEREATA
ETAGVADEAD KAEPQPDPEA ARLAAEKEEA RRREEEKERR RLEQEARRER EAEERAARKT
GATAPAAKGK QKKGRESLSM GAGKPGRRGG KKGGRRAASG GEAAKQLQHG FAKPTQPVVR
EVEIPESITV GDLAQKMSVK AAVLIKEMMK QGVMATINQA LDQDTAVLLV EEMGHKPVIV
RADALEEEVL QDTSQAQEGD KAPRPPVVTV MGHVDHGKTS LLDNIRRAKV ADAEAGGITQ
HIGAYHVETD RGMVTFLDTP GHEAFTAMRA RGAQLTDIVV LVVAADDGVM PQTEEAVRHA
KAAEVPMVVA VNKIDKPDAD PDRVKQELSQ MEVIPEEWGG DVQFIHVSAK QGEGLDDLLE
AILLQAELME LGAVAEGNAS GIVLESSLDK GRGPVATVLV QSGLLKKGDS LLCGTEYGRV
RALIDETGKR VDEAGPSIPV VVLGLSGLPS AGDDMVVVDD EKKAREVAEM RKERQRDKRL
AQQQAARMEN LFNQMKEDEV NTVNLVVKAD VQGSAEALQQ SLANLSTDDI QVKVISSGVG
AINESDVNLA LASNAILIGF NVRADAAARR LVQENDVDLH YYSVIYDAIE QVKNAISGML
EPELEEHIIG LAEVKDVFRS SKLGAVAGCL VTEGAVRRKN PIRVLRDNVV IYEGELESLR
RHKDDVTEVK SGTECGIGVK NYNDVRIGDQ IECYERVEVR REL
|
|---|
| |