| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1943 |
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| Symbol | |
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| ID | 4268111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 2209349 |
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| End bp | 2210632 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638126697 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_742775 |
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| Protein GI | 114321092 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.0780102 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTGGA TCATGGTCGG CATCATGGTG GGGCTGCTGC TCCTGGGCTT CCCGCTGATG
GTGCCGCTGC TCTCCGCAGC CCTCTACGTC ATGCTGTTCG AGCTGGATTT CATCAGCACG
AACCGCATTG TCGCGCAAAT GGTCTCCGGC ATCTCCTCGC CGGTGCTGGC GGCGGTGCCG
TTGTTCATCC TCGCCGCCGA CATCATGACC AAGGGCCGCA CCGCCAACCG TCTGTTGGAT
CTGGTCATGA GCTTCTTCGG CCACCTGCGC GGGGGGCTGC CGGTCACCGC GGCCATCAGC
TGCACCCTTT TCGGTGCGGT CTCCGGCTCC ACCCAGGCGA CGGTGGTGGC CATCGGCGGG
CCGCTGCGCC CAAAGCTGAT CAAGGCCGGC TATAAGGACA GCTTCACCAC CGCACTGATC
ATCAACGCCA GTGACATCGC CCTGCTCATC CCGCCGAGCA TCGGCATGAT CGTCTACGGC
GTGGTCTCCC GCACCTCGGT GCGCGAACTG TTCATCGCCG GCATCCTGCC CGGGCTGCTG
ATCCTGCTCT TCTTCTGTGT CTACACCTAT ATCTACTCCC GGCTAAAGCA GATCCCGGTG
CAGGACAGGT CAACCTGGTC GATTCGGCTG CAGGCCCTGC GCGGGGCCTT GCTACCCATG
GGCTTCCCGA TCATTGTCGT GGGTGGCATC TACGCCGGCT TCTTCTCCCC CACCGAGGCA
GCGGCCGTCT CCGTGGCCTA CGCCTTCCTG CTGGAGGTGG TGATCTTCCG GTCGCTGCAC
ATCAAGGAGA TCTGGCCCAT CGCCCTGTCC ACCGGGTTGA TCACCGCGGT GGTCTTCGTG
CTGGTGGCCT CCGGCCAGGT CTTCTCGTAC GTGGTCTCGG CAGCGCGGAT CCCCCGGGAG
TTGATCGGGC CGCTGATCGA GACCCTGGCG GGCAACCCCG AGATGGCGTT AATCGTCATC
GCCCTCGCCT ACTTCATCGG CTGTATGTTC GTGGACCCCA TCGTGGTCAT CCTGGTGCTG
ACACCGATCT TCACCCCGCT GGTGGACGCC ACCGGGCTCG ACCCGGTGCA CGTGGGCGTC
ATCGTCACCC TGCAGGCGGC CATCGGTTCG GCCACGCCAC CCTTTGGCTG CGACATCTTC
ACCGCCATCG CGATCTTCAG GCGACCTTAC TGGGACACCA TCAAGGGCAC GCCGCCGTTC
ATCTTTATCC TGTTGCTGTC CACGGCGGTG CTCATCGCCT TCCCGCAGAT CTCGCTGTTC
CTGCCGCAAC TGGCCTTCGG CTAG
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| Protein sequence | MIWIMVGIMV GLLLLGFPLM VPLLSAALYV MLFELDFIST NRIVAQMVSG ISSPVLAAVP
LFILAADIMT KGRTANRLLD LVMSFFGHLR GGLPVTAAIS CTLFGAVSGS TQATVVAIGG
PLRPKLIKAG YKDSFTTALI INASDIALLI PPSIGMIVYG VVSRTSVREL FIAGILPGLL
ILLFFCVYTY IYSRLKQIPV QDRSTWSIRL QALRGALLPM GFPIIVVGGI YAGFFSPTEA
AAVSVAYAFL LEVVIFRSLH IKEIWPIALS TGLITAVVFV LVASGQVFSY VVSAARIPRE
LIGPLIETLA GNPEMALIVI ALAYFIGCMF VDPIVVILVL TPIFTPLVDA TGLDPVHVGV
IVTLQAAIGS ATPPFGCDIF TAIAIFRRPY WDTIKGTPPF IFILLLSTAV LIAFPQISLF
LPQLAFG
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