| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1938 |
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| Symbol | |
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| ID | 4270139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 2203984 |
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| End bp | 2205354 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638126692 |
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| Product | signal recognition particle subunit FFH/SRP54 (srp54) |
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| Protein accession | YP_742770 |
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| Protein GI | 114321087 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.730231 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGACA ACCTCAGTGG ACGCCTCTCG GACGCCATGG GCCGCTTGCG CGGCAAAGGG
CGTCTGACCG AGGACAACAT CAAAGATACC CTGCGCGAAG TGCGCATGGC GCTGCTGGAG
GCCGATGTGG CCCTGCCGGT GGTGCGCGAG TTCATCGCCC AGGTGCGCGA GCGCGCCATG
GGGGCGGAGG TGATGAAAAG CCTCACCCCC GGACAGGCAC TGATCAAGAT CGTCAAGGAC
GAACTGGTCC AGGTCATGGG CGAAGAGAAC GACGCCCTGG ACCTGGCCGC CAAGCCGCCA
GCGGTGGTGC TGCTCGCCGG CTTGCAGGGC TCGGGCAAGA CCACCAGCAC CGCTAAGCTC
GCCCGCTATC TCACCGAGCG GGAGAAGAAA AAGGTGCTGG TGGTCAGTTG CGACATCTAC
CGCCCGGCGG CCATCGAGCA GCTGCGTACC CTCGCCGACG AGGTGGGCGT GGAGTGGTTC
CCCAGCGCCG CCGATCAGGA CCCGGAGCGG ATCGCCCGGG CGGCGCTGGA TCACGCCCGC
AAGCAGTTTT TCGACGTCCT GCTGGTGGAC ACCGCCGGCC GGCTGCATAT CGATCAGGAC
CTCATGGACG AGGTGCAGCG CCTGCACAAG GCCGTGACGC CGGTGGAGAC GCTGTTCGTG
GTCGACAGCA TGACCGGCCA GGACGCGGCC AACACCGCGC GCGCCTTCCA CGACGCCCTG
CCGCTCACCG GCGTGATCCT GACCAAGACC GATGGCGACG CCCGGGGCGG GGCGGCCCTG
TCCATCCGCC ACATCACGGG CAAGCCCATC AAGTTCCTGG GGGTGGGGGA GAAGACCACC
GCCCTGGAGC CCTTCCACCC CGACCGGGTC GCCTCCCGGA TCCTCGGCAT GGGCGACGTG
CTCTCCCTGG TCGAGGAGGT GGAGCGCAAG GTCGACCGCA GCGAGGCCGA GAAGCTCAGC
AAGAAGCTCA AGAAGGGCAA GGGCTTCGAC CTTGAGGACT TCAAGTCGCA GATGGAGCAG
GTGAACAAGC TGGGGGGCAT CGGTGGGCTG ATGGACAAGA TGCCGGGCAT GGGCAACATG
TCCGAGCAGG TCAAGGGCCG GATGGACGAC AAGCAGGTGC GCCGCCTGGT GGCCATCATC
AATTCCATGA CCCCGGATGA ACGGCGCCGG CCCGATATCA TCAACGGCTC CCGCAAGCGC
CGCATCGCCC AGGGCTCCGG CACCCAGGTG CAGGAGGTCA ACCGCCTGCT CAAGCAGTTC
AAACAGATGC AGAAGATGAT GAAGCAGATG AAGAAAAAGG GCGGCATGCA GCGGATGATG
CGCCAGCTCG GCGGGGGCGG CGGACAGTTG CCGCCGGGCA TGGGCTTCTG A
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| Protein sequence | MFDNLSGRLS DAMGRLRGKG RLTEDNIKDT LREVRMALLE ADVALPVVRE FIAQVRERAM
GAEVMKSLTP GQALIKIVKD ELVQVMGEEN DALDLAAKPP AVVLLAGLQG SGKTTSTAKL
ARYLTEREKK KVLVVSCDIY RPAAIEQLRT LADEVGVEWF PSAADQDPER IARAALDHAR
KQFFDVLLVD TAGRLHIDQD LMDEVQRLHK AVTPVETLFV VDSMTGQDAA NTARAFHDAL
PLTGVILTKT DGDARGGAAL SIRHITGKPI KFLGVGEKTT ALEPFHPDRV ASRILGMGDV
LSLVEEVERK VDRSEAEKLS KKLKKGKGFD LEDFKSQMEQ VNKLGGIGGL MDKMPGMGNM
SEQVKGRMDD KQVRRLVAII NSMTPDERRR PDIINGSRKR RIAQGSGTQV QEVNRLLKQF
KQMQKMMKQM KKKGGMQRMM RQLGGGGGQL PPGMGF
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