| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1885 |
|---|
| Symbol | |
|---|
| ID | 4269740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 2147604 |
|---|
| End bp | 2149574 |
|---|
| Gene Length | 1971 bp |
|---|
| Protein Length | 656 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638126641 |
|---|
| Product | transglutaminase domain-containing protein |
|---|
| Protein accession | YP_742719 |
|---|
| Protein GI | 114321036 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.307822 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.724755 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGAA CAGCGCACCC GCCGACCCCG CTGCCCCGCC AGGCCCAGGC CTGGCTGCTG
GCCACCCTCG CACTGGTGGC TGCCGCCCAC GCCCCCCACC TGCCCTGGTG GCTTAGCCTG
GGGGCGCTGG CCTGCGGACT GTGGTGCTGG CAAAACACCC GCCAGTGGCG CCGCCTGCCG
CCGCGCAGCC TGCGCTTCGG ACTCACCCTG CTGGCAACCG GCGGGGTCTA CCTGAGCTAC
GGCGAACTCC TGGGCCAGGA GGCGGGAACG GCGTTGCTGC TTGCCATGAC GGGGCTCAAA
CTGCTGGAAC TGCGCAGCCG GCGCGACGCG GTGCTGCTGG TGGGGCTGGG GTTCTTCCTA
GTGGCCACGC AGTTCCTGCG CTCCCAGGAA CTGCCCATGG CCTTTTACCT GGGCGCCTGC
ACCCTGGGGC TGATCATCAG CCTGATGGGG GCGACCCGGG AGAACGCCCC ACCCCACCCG
CTGGCGCATC TGCCTCAGGC GGCCACCTTG CTGCTCCAGG CCCTGCCCTT CATGGTCCTG
CTGTTCTTCC TCTTCCCCCG CCTGGACGGC CCCCTCTGGG CCATGCCGGA GGATGGTGAC
CGGGCCCGGA CCGGGCTCAG CGACCGCATG GAGCCCGGTC AGATCAGCGA ACTGGCCCGC
TCGGACGCCG TGGCCTTCCG GGTGGAGTTC GAGGCCGCGC CGCCCCCCCG ATCCCGGCGT
TACTGGCGCG GCCCGGTGTT CGAGGCGTTC GACGGCCAGC GCTGGCAGCC CGCCGACCAC
CTGCACGAGC GCCGGGAGCC GGTCGAACCA GCGGCGGACG CCGAGCGCAT CGAATACACC
GTGACCCTGG AGCCCCATGG CCAACCCTGG CTGTTCGGCC TGGATCTTCC GCTGACCCTG
GCGGCCGGGC ATGCCAGCGC CCGGGGCGCC CAGACCTGGG AGCGGGACAC GCCGGTCAAC
CGGCGCGTAC GCTACGCGGG CCAAAGCACG CCCGATTACC GTCTGGGCGC CACGCTGGAC
CCGCAGCGCC GTGAGACCAA TCTGGCCCTC GCGCAGAACC GCCACCCGAG AACCGTGGCG
CTGGCCCGCT CCTGGCGGGC GCAGACCGAC GACCCGCAGG CCCTGCTGGG GCAGGCCATC
AGCCATTTCC GTGAGCAGGA TTTCGGCTAC ACCCTGAGCC CACCCCTGAT GCGCGACGAC
ATGGTCGATG AGTTTCTGTT CGACCATCAA CAGGGGTTCT GCGAACACTA CGCGGCCGCC
TTTGCCGTGA TGATGCGTGC CGCCGGAGTA CCCGCCCGCG TAGTCACCGG CTACCTGGGC
GGCGAGATGA ACCCGACCGG CGACTACATG ATCGTGCGCC AGTCCGACGC CCACGCCTGG
AACGAGGTCT GGCTCGAGGG CGAAGGCTGG ATCCGGATCG ACCCCACCGC ACTGGCCGCC
CCGGCACGGC TGGACGAGGG TCTGGCCGGC GCCCTCGGGG ACCCCGCCAG CGCCCCGGCC
CTGGCCCGGC TGGACGCCTC GTGGCTGCGC GACCTGCGCC TGCGCTGGGA TGCGGTGAAC
ATGACCTGGC ACCGCTGGAT GCTCGGTTAC GGCCCGGAGT TGCAGCGCCA GTGGCTGGAA
CGCCTGGGGC TACAGAGCTG GCAACAAGCG GTGATGGCCC TGGGCCTGGC CCTGATCGCC
GCCTCCCTGC TGCTGGCCTG GGTCACGCTT TACCGCAACG CCCCGCCTGC CGCCGATCCG
GCCGTCCGTG CCTGGCAGCG TCTGTGCCGG CGTCTGGCCC GCCGGGGCCT GCCCCCACGG
CCGGGTGAGC CACCCAACTG CTATGCCCGC CGGATTGCCC GGGCGCGCCC GGACCTGGCT
GCCGCCATCT TGCATGTGGC CCGGCTCTAC CAGCAGTATC GGTATGAACC CAACCCCAGC
CAGGCCGACC TGCAGGCCCT CCGCAAATGC ATCAGACGCC TGCGGCCCTG A
|
|---|
| Protein sequence | MSGTAHPPTP LPRQAQAWLL ATLALVAAAH APHLPWWLSL GALACGLWCW QNTRQWRRLP
PRSLRFGLTL LATGGVYLSY GELLGQEAGT ALLLAMTGLK LLELRSRRDA VLLVGLGFFL
VATQFLRSQE LPMAFYLGAC TLGLIISLMG ATRENAPPHP LAHLPQAATL LLQALPFMVL
LFFLFPRLDG PLWAMPEDGD RARTGLSDRM EPGQISELAR SDAVAFRVEF EAAPPPRSRR
YWRGPVFEAF DGQRWQPADH LHERREPVEP AADAERIEYT VTLEPHGQPW LFGLDLPLTL
AAGHASARGA QTWERDTPVN RRVRYAGQST PDYRLGATLD PQRRETNLAL AQNRHPRTVA
LARSWRAQTD DPQALLGQAI SHFREQDFGY TLSPPLMRDD MVDEFLFDHQ QGFCEHYAAA
FAVMMRAAGV PARVVTGYLG GEMNPTGDYM IVRQSDAHAW NEVWLEGEGW IRIDPTALAA
PARLDEGLAG ALGDPASAPA LARLDASWLR DLRLRWDAVN MTWHRWMLGY GPELQRQWLE
RLGLQSWQQA VMALGLALIA ASLLLAWVTL YRNAPPAADP AVRAWQRLCR RLARRGLPPR
PGEPPNCYAR RIARARPDLA AAILHVARLY QQYRYEPNPS QADLQALRKC IRRLRP
|
|---|
| |