| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1871 |
|---|
| Symbol | |
|---|
| ID | 4268089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 2133649 |
|---|
| End bp | 2135142 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638126627 |
|---|
| Product | Ppx/GppA phosphatase |
|---|
| Protein accession | YP_742705 |
|---|
| Protein GI | 114321022 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0248] Exopolyphosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.855928 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.965208 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAGC CGGATATCCT GGCCGCTGTC GATCTGGGTT CCAACAGCTT CCATATGATC
GTCGCCCGCC ACGAGGGCGG ACAGCTGCGC ATCCTGGACC GGTTGCGAGA GCCGGTCCGT
CTTGCCGAGG GACTGGAGAC CCACCGCACC CTGAGCGCGC CGGCTCGGGA GCGTGCTCTG
GCCTGTCTGC GCCGGTTCGG CCAGCGTTTG CGTGAGGTGG ATGCCGGCGG GGTTCGGGCA
GTGGGTACCA ATACCCTGCG CAGGGCCCGG CAGAAGCGGG GCTTCCTTGA GGAGGCCGAG
GCGGCCCTGG GGCACGGGAT TGAGATCATA CCGGGTTACG AGGAGGCGCG GCTGGTCTAC
CTGGGCGTGG CCCGAAGCCT GGATTTCGAT GGCCGCCCGC GGCTGGTGGT GGACATCGGG
GGAGGCAGCA CCGAATTGAT CATCGGGGCC GGGGAGCAGC CCCGAGCCAT GGACAGCCTG
CACATGGGCT GCGTGAGCTT TACCGAGCGC TATTTCCCGG GCGGCGAGAT TACTCCGGCG
TGCATGGAGC GGGCGTTGAC AGCCGCGGGT GTGGAGATGG AGCCGGTGGG CGCCCATTAT
CAGACGCCCC TTTGGGCGGA GGCCGTGGGG GCCTCGGGGA CGATCCGGGC CGTGGCCAAC
GTGGTCCAGG CGGCGGGCTG GTGCGACTAC GGCATCACCC GGGAGGCGCT GCAGCGGCTC
GGTGACACGC TCCTGAGCGC CGGCCACGTG GATCGGCTGC GGCTGGACGG GTTGAGCGAT
GACCGTCGGG TGGTGTTGCC CGGCGGCGTC GCTGTGCTCA GCGCGGTGTT CGAGACCCTG
GGTGTGGGCC GGATGGAGGT GGCCGAGGGG GCGCTGCGTG AGGGGCTGCT CTACGACCTG
GTGGGGCGCC TGGGGGAGGC GGACGTGCGC GCCGCCACGG TGGAGAGCCT GGTCCGGCGC
TACCATGTGG ATGAACTGCA GGCCGGACGG GTGGCCGCCA CCGCCCACTA TTGCCTGCAG
CAGGTGGCCG CTGATTGGTC ACTGCAGCGG CCCTTCTGGG CGCGCCTGTT GCGCTGGGCG
GCGCAACTGC ATGAGGTGGG CCTGGATATC TCCCACAGCC AGTACCACAA GCATGGGGCC
TACATCACCC GCCACGCGGA TATGGCCGGG TTTTCCAGCC TGGACCAGCA GCTGTTGGCG
GTGCTGGTCC GGGCCCACCG GCGCAAGTTC CCGGTCGTCG AGTTCGACGC CCTGCCGGGC
AGCCACCGGA TCCCGTTGAT TCGCCTGGGG GTGTTATTGC GGCTCGCCGT CCTGCTGCAC
CGCAGCCGCA GCGAGACCCC GCTGCCCGAT TTCCGCCTGC GTGGCAACGG CCACCACCTG
AAGCTGGAAC TCCCCTCGGA CTGGCTGGAG CAACACCCCC TGGTGCGCGC GGATCTGGAA
CAGGAACGCC GCTGGCTCAA GCGGGCGGAT CTGCGACTCT ATCTCGGCGC TTGA
|
|---|
| Protein sequence | MGKPDILAAV DLGSNSFHMI VARHEGGQLR ILDRLREPVR LAEGLETHRT LSAPARERAL
ACLRRFGQRL REVDAGGVRA VGTNTLRRAR QKRGFLEEAE AALGHGIEII PGYEEARLVY
LGVARSLDFD GRPRLVVDIG GGSTELIIGA GEQPRAMDSL HMGCVSFTER YFPGGEITPA
CMERALTAAG VEMEPVGAHY QTPLWAEAVG ASGTIRAVAN VVQAAGWCDY GITREALQRL
GDTLLSAGHV DRLRLDGLSD DRRVVLPGGV AVLSAVFETL GVGRMEVAEG ALREGLLYDL
VGRLGEADVR AATVESLVRR YHVDELQAGR VAATAHYCLQ QVAADWSLQR PFWARLLRWA
AQLHEVGLDI SHSQYHKHGA YITRHADMAG FSSLDQQLLA VLVRAHRRKF PVVEFDALPG
SHRIPLIRLG VLLRLAVLLH RSRSETPLPD FRLRGNGHHL KLELPSDWLE QHPLVRADLE
QERRWLKRAD LRLYLGA
|
|---|
| |