| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1850 |
|---|
| Symbol | |
|---|
| ID | 4269218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 2110027 |
|---|
| End bp | 2110623 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638126606 |
|---|
| Product | RNase HII |
|---|
| Protein accession | YP_742684 |
|---|
| Protein GI | 114321001 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0164] Ribonuclease HII |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.26934 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACCC TGCCGCTGGA TGGCAGGGCT AGCGTACTCC TGGCCGGAGT GGACGAGGTG
GGACGCGGTC CTCTGGCCGG CGCGGTGGTG GCGGCAGCGG TGATCCTGGA CCCGGACCGG
CCGATCGCCG GTCTGCGGGA TTCCAAGCGC CTTAGCGCGG CCCGACGGTC AGAGCTGGAC
CGGCGGATCC GCGCCCAGGC CCTGGCCGTT TCCTTGGGCC GTGCCGAGGT GGCGGAGATC
GACCGGCTGA ACATCCTGCA GGCCAGCATG CTGGCCATGC AGCGGGCGGT GGCCGGGCTG
GATCCCGCGC CGGTGCAGGC GCTGGTGGAT GGTAACCGGG CGCCGGCGTT ACCCTGTCCT
GCCCAGGCCA TCGTCAAGGG GGATGACCGG GTGCCGGCCA TTGCCGCGGC GTCCATCCTG
GCCAAGCAGG CGCGCGACGC CGAGATGCGG GCCCTGGCCG AGCAGTACCC CGGCTACGGG
TTCGAGCGCC ACATGGGCTA CCCGACCACC GAGCACCTGC AGGCCCTGCG GACCCTGGGG
GCCTGCCCGG CGCACCGGCG TAGTTTCGCG CCGGTGCGCC GATGCCTGCT GGGCTGA
|
|---|
| Protein sequence | MDTLPLDGRA SVLLAGVDEV GRGPLAGAVV AAAVILDPDR PIAGLRDSKR LSAARRSELD
RRIRAQALAV SLGRAEVAEI DRLNILQASM LAMQRAVAGL DPAPVQALVD GNRAPALPCP
AQAIVKGDDR VPAIAAASIL AKQARDAEMR ALAEQYPGYG FERHMGYPTT EHLQALRTLG
ACPAHRRSFA PVRRCLLG
|
|---|
| |