| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1840 |
|---|
| Symbol | |
|---|
| ID | 4269208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 2098001 |
|---|
| End bp | 2098834 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638126596 |
|---|
| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
|---|
| Protein accession | YP_742674 |
|---|
| Protein GI | 114320991 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.2002 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTTT GCGGTTTCCG GGTGGGTCTG GACAGGCCGC TGTTCCTCAT CGCCGGTCCC
TGCGTGGTCG AGTCCGAGCA ACTGGCGCTG GACACGGCCG GGGCACTGGC GGAGATGACC
GGTGAGCTGG GCATCCCGTT CATCTACAAG TCCTCCTTTG ACAAGGCCAA CCGCAGCTCC
CACGAGAGCT ATCGGGGCCC CGGTCTGGAG GCCGGGCTCC GGGTGCTGGA GCAGGTACGC
CGCCAGATCG GCGTCCCGGT GATCACCGAC GTGCACGAGG ACACCCCGCT GGTCGAGGTG
GCGTCGGTGG TGGACGTGCT CCAGACCCCG GCCTTCCTGT GCCGGCAGAC CAATTTCATC
CAGAACGTGG CCCGGCAGGG CCGGCCGGTG AATATCAAGA AGGGCCAATT CCTGGCCCCC
TGGGACATGC GCCATGTGGT CGCCAAGGCC CGCGAGGCGG GCAACCAGCA GATCATGGTC
TGCGAGCGGG GCGTCTCCTT TGGCTACAAC AACCTGGTCT CGGACATGCG CGCCCTGGCA
GTGATGCGCG AGACCGGGGC CCCGGTGGTG TTTGACGCCA CCCACTCGGT GCAGTTGCCG
GGCGGGCAGG GCAGTGCCTC GGGGGGGCAG CGGGAATTCG TCCCGGTACT GGCGCGGGCG
GCGGTGGCCG CCGGCGTGGC CGGGCTGTTC ATGGAGACCC ACCCCGACCC GGACCAGGCG
CTCTCCGACG GCCCCAACGC CTGGCCGCTG GAGCGCATGC GCGAGCTGCT GGAGACGCTC
ATGGAACTGG ACCAGGTGGT CAAGGGGCGC GGCTTCACGG AACAGGGCCT TTAG
|
|---|
| Protein sequence | MDLCGFRVGL DRPLFLIAGP CVVESEQLAL DTAGALAEMT GELGIPFIYK SSFDKANRSS
HESYRGPGLE AGLRVLEQVR RQIGVPVITD VHEDTPLVEV ASVVDVLQTP AFLCRQTNFI
QNVARQGRPV NIKKGQFLAP WDMRHVVAKA REAGNQQIMV CERGVSFGYN NLVSDMRALA
VMRETGAPVV FDATHSVQLP GGQGSASGGQ REFVPVLARA AVAAGVAGLF METHPDPDQA
LSDGPNAWPL ERMRELLETL MELDQVVKGR GFTEQGL
|
|---|
| |