Gene Mlg_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_1836 
Symbol 
ID4268191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp2095096 
End bp2095590 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content69% 
IMG OID638126592 
Product2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
Protein accessionYP_742670 
Protein GI114320987 
COG category[I] Lipid transport and metabolism 
COG ID[COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
TIGRFAM ID[TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0989794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGGG TAGGACAGGG CTTTGATGCC CACCGGTTCG GCGAGCCCGG CACCCCCCTG 
ATCCTGGGTG GGGTGCAGGT CCCCCATGAG CGTGGGCTGG CGGCCCACTC CGACGGCGAC
GTGCTGATGC ACGCGGTCAC CGATGGGCTC CTGGGTGCGG CCGGTGAGGG CGATCTGGGC
ACCCACTTTC CCGACTCAGA CGATGCCTAT AAAGGCATCG ACAGCCGGAT CCTGCTGCGC
GACGCGCTGC AGCGGGTCCG GGCCGGTGGC TGGCGCGTGG TGAACGTCGA CGCCACCCTG
ATCGCCCAGG CACCCCGCAT GAACCCCCAT GTGGGGGCCA TGCGCGACCA TCTGGCCGCC
GACCTCGAGG TGGCGCCTTC GGCGGTAAAC GTCAAGGCGA CCACCACCGA GCGCATGGGG
TTTCCGGGCC GGGGCGAGGG CATTGCCGCC ATGGCGGTGG TGCTGATCGC CCGGGATGGT
TTTTTTGAGC ACTGA
 
Protein sequence
MIRVGQGFDA HRFGEPGTPL ILGGVQVPHE RGLAAHSDGD VLMHAVTDGL LGAAGEGDLG 
THFPDSDDAY KGIDSRILLR DALQRVRAGG WRVVNVDATL IAQAPRMNPH VGAMRDHLAA
DLEVAPSAVN VKATTTERMG FPGRGEGIAA MAVVLIARDG FFEH